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The map label for this gene is 17231444

Identifier: 17231444

GI number: 17231444

Start: 4769845

End: 4770564

Strand: Direct

Name: 17231444

Synonym: alr3952

Alternate gene names: NA

Gene position: 4769845-4770564 (Clockwise)

Preceding gene: 17231442

Following gene: 17231446

Centisome position: 74.37

GC content: 48.89

Gene sequence:

>720_bases
ATGCAATCTCCATCCTCCTTTTCTGAGGCATCACGCCCTTTTTTGACTTGGCAACGCATTCTTGACTGGGCTCAAGAACA
CTATCGCTGCCGTACCTTTAGCAAAGATGAGCGCATTCCAGCAAGACCTGGTTTGCTTTATTTAGTGCAGAGAGGTGCGA
TCCGCATGGTAGGAACCGCCCAGGTTAGTGCTACTGCAAGTCAATTGACTTCTCGACGGATCAACAGAACCCCAGAAGAA
GCTTTCTTGGGATTTGTGGGCGCGGGACAACCGTTTGAAATTGTGGCTCAGTCTCCTTTCACGCTCCAGTCCTACGCTCA
CGTTGACCAAACCGCCGTACTGTGGATGTATTGGCACGATCTAGATAACTGGCCTCACTTCCGGCGTGAAGTGATGGATG
CTTTCAGATACCAACACCAGCGTAAGTTGCTGTGGCTTAGTGCCTTGGGACAACGGCGTACAATTGACAGACTCTTAGGA
TTCCTCACCCTATTGATTGAGGAATATGGAGAACCAGCCATGAGCGACACTGATCCCGATGTCATTCGTGGTTATTGTTT
GCCTTTCCCCTTAACCCATGCTCAAATTGGTAGCGCGATCGGTTCAACTCGTGTAACCGTTACTCGTTTAATGGGTAAGT
TGCGTCAGCGTGGCTTAATCCTTACTCAAGGGGATAACTTGATTTGTTTGCCAGCAGAGTCAATCAACAGAGCTAGCTAA

Upstream 100 bases:

>100_bases
CTGACGCTGTTAGGCGTTAAGCCTACCTCAAAAAACACAAAGACACTCCTTGCACCTTTTTATTACGTCTTTGTCTTCAG
CCGAACGCTCTTTGTTACCT

Downstream 100 bases:

>100_bases
AGCTTCATTGACTGTTTATAGGGCATCTACGGTTGGGAACTACCACTCTGCCAACCAGCAATAGCAGATTTTGGTACATT
TTAACGGTCAAGCTCCGCTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Crp Family Transcriptional Regulatory Protein; Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator CRP Family Protein; Transcriptional Regulator Crp/Fnr Family Protein; CRP Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQSPSSFSEASRPFLTWQRILDWAQEHYRCRTFSKDERIPARPGLLYLVQRGAIRMVGTAQVSATASQLTSRRINRTPEE
AFLGFVGAGQPFEIVAQSPFTLQSYAHVDQTAVLWMYWHDLDNWPHFRREVMDAFRYQHQRKLLWLSALGQRRTIDRLLG
FLTLLIEEYGEPAMSDTDPDVIRGYCLPFPLTHAQIGSAIGSTRVTVTRLMGKLRQRGLILTQGDNLICLPAESINRAS

Sequences:

>Translated_239_residues
MQSPSSFSEASRPFLTWQRILDWAQEHYRCRTFSKDERIPARPGLLYLVQRGAIRMVGTAQVSATASQLTSRRINRTPEE
AFLGFVGAGQPFEIVAQSPFTLQSYAHVDQTAVLWMYWHDLDNWPHFRREVMDAFRYQHQRKLLWLSALGQRRTIDRLLG
FLTLLIEEYGEPAMSDTDPDVIRGYCLPFPLTHAQIGSAIGSTRVTVTRLMGKLRQRGLILTQGDNLICLPAESINRAS
>Mature_239_residues
MQSPSSFSEASRPFLTWQRILDWAQEHYRCRTFSKDERIPARPGLLYLVQRGAIRMVGTAQVSATASQLTSRRINRTPEE
AFLGFVGAGQPFEIVAQSPFTLQSYAHVDQTAVLWMYWHDLDNWPHFRREVMDAFRYQHQRKLLWLSALGQRRTIDRLLG
FLTLLIEEYGEPAMSDTDPDVIRGYCLPFPLTHAQIGSAIGSTRVTVTRLMGKLRQRGLILTQGDNLICLPAESINRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27326; Mature: 27326

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPSSFSEASRPFLTWQRILDWAQEHYRCRTFSKDERIPARPGLLYLVQRGAIRMVGTA
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCEEEEECH
QVSATASQLTSRRINRTPEEAFLGFVGAGQPFEIVAQSPFTLQSYAHVDQTAVLWMYWHD
HHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEEECC
LDNWPHFRREVMDAFRYQHQRKLLWLSALGQRRTIDRLLGFLTLLIEEYGEPAMSDTDPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VIRGYCLPFPLTHAQIGSAIGSTRVTVTRLMGKLRQRGLILTQGDNLICLPAESINRAS
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCEEEECHHHCCCCC
>Mature Secondary Structure
MQSPSSFSEASRPFLTWQRILDWAQEHYRCRTFSKDERIPARPGLLYLVQRGAIRMVGTA
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCEEEEECH
QVSATASQLTSRRINRTPEEAFLGFVGAGQPFEIVAQSPFTLQSYAHVDQTAVLWMYWHD
HHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEEECC
LDNWPHFRREVMDAFRYQHQRKLLWLSALGQRRTIDRLLGFLTLLIEEYGEPAMSDTDPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VIRGYCLPFPLTHAQIGSAIGSTRVTVTRLMGKLRQRGLILTQGDNLICLPAESINRAS
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCEEEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA