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The map label for this gene is yidA [H]

Identifier: 17231442

GI number: 17231442

Start: 4767515

End: 4768330

Strand: Direct

Name: yidA [H]

Synonym: alr3950

Alternate gene names: 17231442

Gene position: 4767515-4768330 (Clockwise)

Preceding gene: 17231441

Following gene: 17231444

Centisome position: 74.33

GC content: 45.22

Gene sequence:

>816_bases
ATGATTAAACTACTCGTATTAGATATAGATGGCACAATTTCGGGAGAGTCGAACACCATCAGCACCTCTGTCAAGCAAGC
GATCGCCGCAGTGCAAGCACGAGGTATTCAAGTGGCGATCGCTACTGGAAGGATGTATCGTTCGGCACTCCGCTTTCATC
AAGATATTAACTCTACTTTGCCCCTAGCCGCTTATCAAGGAGCCTGGATTCAAGACCCATCTGACCAAAAAATCCATCAA
CATCTACCCGTAAGTAGAGAAACTGCCGAGCAATTATTAGATTATTTTGAACAGCCACAATGGCGATCGCTTTTATCGAT
TCATTTCTACATTAATGATCAACTCTACGTGCGGGAAGTCACCCAAGAGACTGCAACTTACGCACAACGTTCTGGCATTA
CTCCCATTGCTGTAGGTGATTTGCGCCAAACTTTAACTAATGCACCCACAAAAATTTTAGCCTTGTGTGATGACACAGAG
GTAATCAGCAACCTCTTGGGCAGTTTGCGCCTACAATACACACCTGCTGAACTTTATCTCACCACATCCGTTGCTACTTT
CTTTGAAGCCACTAACGCCAGTGTCAACAAGGGTAATGCTGTACGTTACCTAGCTGAAGACTTACTAGGCTTACAAAGCG
CTAATGTTATGTGCATTGGCGATAACTTCAATGATTTGGAAATGCTGGAATACGCTGGTATTGGTATCGCTATGGGAAAC
GCTCCCGCAGGAGTGCAGGCGATCGCTCAATGGGTAGCCCCTACTGTCGAAGAGGATGGGGCTGCTGTTGCAATTGAAAA
ATTTCTACTTTCGTAA

Upstream 100 bases:

>100_bases
GCAGTTAGGTTTGCCAATAGATTGGTAAATCAGGCATGAGGCAAGTAGATAAGAAGCAGGGGAAAGAACTAATGACAACT
GACAACTGACAACTGACTAA

Downstream 100 bases:

>100_bases
GCCTACTTGATTAATTTTTGTAAAGTGCAGAATTAATATTTCCGCAGAACCTAGATACCGAAAAGTTCTTTTGTTGTTTA
GATTCTAAAAAAGTTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIKLLVLDIDGTISGESNTISTSVKQAIAAVQARGIQVAIATGRMYRSALRFHQDINSTLPLAAYQGAWIQDPSDQKIHQ
HLPVSRETAEQLLDYFEQPQWRSLLSIHFYINDQLYVREVTQETATYAQRSGITPIAVGDLRQTLTNAPTKILALCDDTE
VISNLLGSLRLQYTPAELYLTTSVATFFEATNASVNKGNAVRYLAEDLLGLQSANVMCIGDNFNDLEMLEYAGIGIAMGN
APAGVQAIAQWVAPTVEEDGAAVAIEKFLLS

Sequences:

>Translated_271_residues
MIKLLVLDIDGTISGESNTISTSVKQAIAAVQARGIQVAIATGRMYRSALRFHQDINSTLPLAAYQGAWIQDPSDQKIHQ
HLPVSRETAEQLLDYFEQPQWRSLLSIHFYINDQLYVREVTQETATYAQRSGITPIAVGDLRQTLTNAPTKILALCDDTE
VISNLLGSLRLQYTPAELYLTTSVATFFEATNASVNKGNAVRYLAEDLLGLQSANVMCIGDNFNDLEMLEYAGIGIAMGN
APAGVQAIAQWVAPTVEEDGAAVAIEKFLLS
>Mature_271_residues
MIKLLVLDIDGTISGESNTISTSVKQAIAAVQARGIQVAIATGRMYRSALRFHQDINSTLPLAAYQGAWIQDPSDQKIHQ
HLPVSRETAEQLLDYFEQPQWRSLLSIHFYINDQLYVREVTQETATYAQRSGITPIAVGDLRQTLTNAPTKILALCDDTE
VISNLLGSLRLQYTPAELYLTTSVATFFEATNASVNKGNAVRYLAEDLLGLQSANVMCIGDNFNDLEMLEYAGIGIAMGN
APAGVQAIAQWVAPTVEEDGAAVAIEKFLLS

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=30.6859205776173, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786982, Length=280, Percent_Identity=26.0714285714286, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29580; Mature: 29580

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLVLDIDGTISGESNTISTSVKQAIAAVQARGIQVAIATGRMYRSALRFHQDINSTL
CEEEEEEEECCEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCCC
PLAAYQGAWIQDPSDQKIHQHLPVSRETAEQLLDYFEQPQWRSLLSIHFYINDQLYVREV
CCHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEHHH
TQETATYAQRSGITPIAVGDLRQTLTNAPTKILALCDDTEVISNLLGSLRLQYTPAELYL
HHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEECCHHEEE
TTSVATFFEATNASVNKGNAVRYLAEDLLGLQSANVMCIGDNFNDLEMLEYAGIGIAMGN
EHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECC
APAGVQAIAQWVAPTVEEDGAAVAIEKFLLS
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIKLLVLDIDGTISGESNTISTSVKQAIAAVQARGIQVAIATGRMYRSALRFHQDINSTL
CEEEEEEEECCEECCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCCC
PLAAYQGAWIQDPSDQKIHQHLPVSRETAEQLLDYFEQPQWRSLLSIHFYINDQLYVREV
CCHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEHHH
TQETATYAQRSGITPIAVGDLRQTLTNAPTKILALCDDTEVISNLLGSLRLQYTPAELYL
HHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEECCHHEEE
TTSVATFFEATNASVNKGNAVRYLAEDLLGLQSANVMCIGDNFNDLEMLEYAGIGIAMGN
EHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECC
APAGVQAIAQWVAPTVEEDGAAVAIEKFLLS
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]