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The map label for this gene is 17231423

Identifier: 17231423

GI number: 17231423

Start: 4746460

End: 4747131

Strand: Direct

Name: 17231423

Synonym: alr3931

Alternate gene names: NA

Gene position: 4746460-4747131 (Clockwise)

Preceding gene: 17231422

Following gene: 17231424

Centisome position: 74.0

GC content: 43.15

Gene sequence:

>672_bases
GTGTTTCCCCTCTACGACGAAAATCCGACGCGAATCACCCCCTATTTCACCTACGGTTTAATTGGGATGAACGTTTTAGT
TTTTCTTCACGAAGTGAGTCTGTCTAATGCTCAATTAAATCAGTTTTTCAGTCAGTATGCAGTAGTCCCTCAAGAGTTAA
CCTCCAATTTAGCTGGTGAATGGCCGACGTTATTCACCTCGCAATTTTTGCACGGTGGTTGGTGGCATTTGATATCGAAT
ATGGTGTTTCTTTGGGTGTTTGGCAACAATATTGAAGAACGCCTGGGGCATTTCAAATATTTAATTTTTTATTTGGCTTG
TGGTGCTTTAGCTGCCTTGTGTCAGTGGTTTATTGGTATGTCTTCCACCATTCCTTCCTTGGGTGCTAGTGGTGCCATTT
CCGGGGTTCTCGGTGCATACCTGATTCGTTTTCCCCAAGCTAGGGTGACAACGTTAATTTTCTTAGGTTTCTTTGTAACA
ACAATCAGTGTTCCAGCCCTAGTGATTATCGGCATTTTCTTTGTGCAAAATGTTATATCCGGTCTTGTCAGCCTACAAGC
AGCCGCTAACATGAGTGTACAAACAGGGGGTGTCGCTTATTGGGCGCACATTGGTGGTTTTGTGTTTGGCATAATTCTTG
CCCCTATATTTGGTTTGTTTAGACGGGACTAA

Upstream 100 bases:

>100_bases
TACAGTAGTCCTGCTAGCCGCGTAAGCCTAATTACCTAGACTAAACAACTGCTAAGCATTCAAGCTATATTGCAGTTATC
AATGATTAGGAAAAACACTA

Downstream 100 bases:

>100_bases
TAGCCAAACCGGGGGATTGGGTGTTAGCGAATCAACCTCGTTTATATCCAAATCTAGAGCTTTTGATTATTCTATTATGT
GATTGCTTCATTGGTCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Transmembrane Rhomboid Family Protein; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Membrane-Associated Serine Protease; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR; Rhomboid Protease

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFPLYDENPTRITPYFTYGLIGMNVLVFLHEVSLSNAQLNQFFSQYAVVPQELTSNLAGEWPTLFTSQFLHGGWWHLISN
MVFLWVFGNNIEERLGHFKYLIFYLACGALAALCQWFIGMSSTIPSLGASGAISGVLGAYLIRFPQARVTTLIFLGFFVT
TISVPALVIIGIFFVQNVISGLVSLQAAANMSVQTGGVAYWAHIGGFVFGIILAPIFGLFRRD

Sequences:

>Translated_223_residues
MFPLYDENPTRITPYFTYGLIGMNVLVFLHEVSLSNAQLNQFFSQYAVVPQELTSNLAGEWPTLFTSQFLHGGWWHLISN
MVFLWVFGNNIEERLGHFKYLIFYLACGALAALCQWFIGMSSTIPSLGASGAISGVLGAYLIRFPQARVTTLIFLGFFVT
TISVPALVIIGIFFVQNVISGLVSLQAAANMSVQTGGVAYWAHIGGFVFGIILAPIFGLFRRD
>Mature_223_residues
MFPLYDENPTRITPYFTYGLIGMNVLVFLHEVSLSNAQLNQFFSQYAVVPQELTSNLAGEWPTLFTSQFLHGGWWHLISN
MVFLWVFGNNIEERLGHFKYLIFYLACGALAALCQWFIGMSSTIPSLGASGAISGVLGAYLIRFPQARVTTLIFLGFFVT
TISVPALVIIGIFFVQNVISGLVSLQAAANMSVQTGGVAYWAHIGGFVFGIILAPIFGLFRRD

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=217, Percent_Identity=27.6497695852535, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24637; Mature: 24637

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLYDENPTRITPYFTYGLIGMNVLVFLHEVSLSNAQLNQFFSQYAVVPQELTSNLAGE
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
WPTLFTSQFLHGGWWHLISNMVFLWVFGNNIEERLGHFKYLIFYLACGALAALCQWFIGM
CHHHHHHHHHCCHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTIPSLGASGAISGVLGAYLIRFPQARVTTLIFLGFFVTTISVPALVIIGIFFVQNVIS
HHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVSLQAAANMSVQTGGVAYWAHIGGFVFGIILAPIFGLFRRD
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPLYDENPTRITPYFTYGLIGMNVLVFLHEVSLSNAQLNQFFSQYAVVPQELTSNLAGE
CCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
WPTLFTSQFLHGGWWHLISNMVFLWVFGNNIEERLGHFKYLIFYLACGALAALCQWFIGM
CHHHHHHHHHCCHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTIPSLGASGAISGVLGAYLIRFPQARVTTLIFLGFFVTTISVPALVIIGIFFVQNVIS
HHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVSLQAAANMSVQTGGVAYWAHIGGFVFGIILAPIFGLFRRD
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA