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The map label for this gene is msrB [H]

Identifier: 17231393

GI number: 17231393

Start: 4704938

End: 4705432

Strand: Direct

Name: msrB [H]

Synonym: alr3901

Alternate gene names: 17231393

Gene position: 4704938-4705432 (Clockwise)

Preceding gene: 17231392

Following gene: 17231396

Centisome position: 73.36

GC content: 41.82

Gene sequence:

>495_bases
ATGAAAAAACGCTATTTTTTACAAACTAGTGCTGCATTAGTTGGCACAGCTTTGTTACCACCGTATATTTTCCACAGGTC
AAGCATCATGGCAACTTCTAATACCAAGTTTGAAATCGCTAAATCTGAACAAGAATGGCAAACAATATTAACCCCTGAAC
AGTTCCGTGTATTGCGGAAACATGGCACTGAAAGGGCTTTTACTAGTCCACTCGATAAAGAATATAGTCAGGGGACTTAT
GTTTGTGCTGCTTGTGATCAGCCCTTGTTTACATCTGATACTAAATTTAACAGTGGTACTGGCTGGCCTAGTTTTTTCAA
CCCCATTGAAGGTGGAATTGGTACTACTGTAGACAGGTCGTTTTTCATGACTAGAGTTGAAGTACATTGCAGTCGTTGTG
GTGGACATCTAGGTCATGTGTTTGATGATGGCCCTGCCCCCACCGGTAAGCGCTACTGTATGAATGGTGTATCGTTAAAG
TTTGAGCCTGCCTAA

Upstream 100 bases:

>100_bases
TCGCCCATCATACAAATACCGACACCAAGCAATTTTTAATCATTTTCCCTGCTTTCTATCACCTATGGTCTCTAATATTG
ATTAAAACTATCCAGCGCAT

Downstream 100 bases:

>100_bases
GGTACGCAAAAGCAAGATTAGTCTTAGTCCCAATTAAAGATGAAAGCGATCGCCTTCTAATCTGTGATAATTAGAGAGCG
ATCGCTTATTATTTTCTATT

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKKRYFLQTSAALVGTALLPPYIFHRSSIMATSNTKFEIAKSEQEWQTILTPEQFRVLRKHGTERAFTSPLDKEYSQGTY
VCAACDQPLFTSDTKFNSGTGWPSFFNPIEGGIGTTVDRSFFMTRVEVHCSRCGGHLGHVFDDGPAPTGKRYCMNGVSLK
FEPA

Sequences:

>Translated_164_residues
MKKRYFLQTSAALVGTALLPPYIFHRSSIMATSNTKFEIAKSEQEWQTILTPEQFRVLRKHGTERAFTSPLDKEYSQGTY
VCAACDQPLFTSDTKFNSGTGWPSFFNPIEGGIGTTVDRSFFMTRVEVHCSRCGGHLGHVFDDGPAPTGKRYCMNGVSLK
FEPA
>Mature_164_residues
MKKRYFLQTSAALVGTALLPPYIFHRSSIMATSNTKFEIAKSEQEWQTILTPEQFRVLRKHGTERAFTSPLDKEYSQGTY
VCAACDQPLFTSDTKFNSGTGWPSFFNPIEGGIGTTVDRSFFMTRVEVHCSRCGGHLGHVFDDGPAPTGKRYCMNGVSLK
FEPA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=128, Percent_Identity=50.78125, Blast_Score=134, Evalue=5e-32,
Organism=Homo sapiens, GI301336162, Length=128, Percent_Identity=50.78125, Blast_Score=134, Evalue=5e-32,
Organism=Homo sapiens, GI73089054, Length=128, Percent_Identity=50.78125, Blast_Score=134, Evalue=5e-32,
Organism=Homo sapiens, GI37620216, Length=124, Percent_Identity=52.4193548387097, Blast_Score=132, Evalue=9e-32,
Organism=Homo sapiens, GI117606353, Length=134, Percent_Identity=46.2686567164179, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=49.5867768595041, Blast_Score=123, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI115532676, Length=123, Percent_Identity=45.5284552845528, Blast_Score=116, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17553450, Length=123, Percent_Identity=45.5284552845528, Blast_Score=116, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=134, Percent_Identity=38.8059701492537, Blast_Score=102, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221378662, Length=137, Percent_Identity=40.8759124087591, Blast_Score=126, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24645799, Length=135, Percent_Identity=44.4444444444444, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI45553335, Length=132, Percent_Identity=43.1818181818182, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI21356369, Length=132, Percent_Identity=43.1818181818182, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI221378664, Length=131, Percent_Identity=43.5114503816794, Blast_Score=123, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24645801, Length=146, Percent_Identity=41.0958904109589, Blast_Score=120, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24645804, Length=143, Percent_Identity=39.8601398601399, Blast_Score=119, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 18317; Mature: 18317

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRYFLQTSAALVGTALLPPYIFHRSSIMATSNTKFEIAKSEQEWQTILTPEQFRVLRK
CCCEEEEEHHHHHHHHHHHCHHHHHCCEEEEECCCEEEEECCCHHHHHHCCHHHHHHHHH
HGTERAFTSPLDKEYSQGTYVCAACDQPLFTSDTKFNSGTGWPSFFNPIEGGIGTTVDRS
CCCCCHHCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCHHCCCCCCCCCHH
FFMTRVEVHCSRCGGHLGHVFDDGPAPTGKRYCMNGVSLKFEPA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEECC
>Mature Secondary Structure
MKKRYFLQTSAALVGTALLPPYIFHRSSIMATSNTKFEIAKSEQEWQTILTPEQFRVLRK
CCCEEEEEHHHHHHHHHHHCHHHHHCCEEEEECCCEEEEECCCHHHHHHCCHHHHHHHHH
HGTERAFTSPLDKEYSQGTYVCAACDQPLFTSDTKFNSGTGWPSFFNPIEGGIGTTVDRS
CCCCCHHCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCHHCCCCCCCCCHH
FFMTRVEVHCSRCGGHLGHVFDDGPAPTGKRYCMNGVSLKFEPA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA