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The map label for this gene is 17231392

Identifier: 17231392

GI number: 17231392

Start: 4703282

End: 4704481

Strand: Direct

Name: 17231392

Synonym: alr3900

Alternate gene names: NA

Gene position: 4703282-4704481 (Clockwise)

Preceding gene: 17231389

Following gene: 17231393

Centisome position: 73.33

GC content: 45.83

Gene sequence:

>1200_bases
GTGATGCAGACAAATTGGAGAATCGGGTCTTTATTTGGTATTCCCCTATTTTTAGATCCTTTGTGGTTTGTGATTTTGGG
TTTAGCAACACTGAACTTTGGCGTGGCTTACCAAGAATGGGGAACGGTGACAGCATGGACGGCTGGGCTGATTATGTCGT
TGCTGCTATTTGGTTCGGTGTTATTACATGAGTTGGGTCATAGTTTGGCAGCGCGATCGCAAGGGATTAAAGTTAACTCT
ATTACTTTATTTCTGTTTGGTGGGATTGCCGCCATTGAGGAAGAATCCAAAACTCCGGGTAAAGCGTTTCAAGTAGCTAT
TGCTGGGCCTTTGGTGAGTATCGGCTTATTCTTACTCTTAAGGTTGGGGAGTACAGTAGTATCTGATAGTAGCCCAGTCA
GTATGATGGTGGGTGATTTGGCGCGGATTAACTTAGTTGTTGCCTTATTTAACCTAATTCCTGGTTTACCTTTAGATGGG
GGTCAAGTGTTGAAAGCTGCACTCTGGCAAATTACCGGAGATCGTTTTCAAGCGGTACATTGGGCAGCCAAAGCCGGACA
AATTTTAGGTTATGGTGCGATCGCCTTAGGTTTTGCCGTAGACTTCTTTACAAGAGAATTAGTCACAGGCTTGTGGATTG
CCCTGTTGGGTTGGTTTGGGGTTCGCAATGCCAACAGCTACGACCGCGTAACCACATTACAAGAAACCTTGCTGGAGGTA
AAAGCTGTGGATGCCATGACTCGTGATTTTCGTGTCATTGATGCCAACCAGACCTTACGTTCCTTTGCTGATTCTTACCT
ATTGGCAACTAGCAACCCAGAAGTTTATTTTGCTGCTTCCGATGGACGTTATCGCGGTATGGTCGCCATTGAGGATTTAC
GCTTGGTGGAAAGAAGCGAATGGGAAACTCAAACTCTCCACAGCATCGCCCATCCTTTAACCGAAATACCTACAGTCGCG
GAATCAACTGCCATAGCTGGAGTCATCAACAAGTTAGAAAATGAACAGTTACCGCGTGTCACCGTACTTACTCCGGCTGG
CGCTGTTGCTGGAATCATTGACCGAGGAGATATTGTCGGCGCATTGGCACAAAAATTAGGTTTGCGTATGACTGACGCAG
AAATTAAGCGCATCAAAGAAGAGGGTAGTTATCCGCCAGGGTTGCAATTGGGGGTAATTGCCAAGTCTATTAATCAGTAG

Upstream 100 bases:

>100_bases
ACGCCACCTACTGGTATGAAGAAAATAGAAAAATCGTATACAAAAAAACACACATAGTATATGTGATGTATTCAATAAAA
ATATTTAGTTTCAGGACAAT

Downstream 100 bases:

>100_bases
TGGCGTGGAAGAGGCAGGATCTGACAGATGTAGGTTTTTGACACTTCACCCTCAAAATACGGGTGTAGGGGTATAGGGAT
TGAGCAAACTATTATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MMQTNWRIGSLFGIPLFLDPLWFVILGLATLNFGVAYQEWGTVTAWTAGLIMSLLLFGSVLLHELGHSLAARSQGIKVNS
ITLFLFGGIAAIEEESKTPGKAFQVAIAGPLVSIGLFLLLRLGSTVVSDSSPVSMMVGDLARINLVVALFNLIPGLPLDG
GQVLKAALWQITGDRFQAVHWAAKAGQILGYGAIALGFAVDFFTRELVTGLWIALLGWFGVRNANSYDRVTTLQETLLEV
KAVDAMTRDFRVIDANQTLRSFADSYLLATSNPEVYFAASDGRYRGMVAIEDLRLVERSEWETQTLHSIAHPLTEIPTVA
ESTAIAGVINKLENEQLPRVTVLTPAGAVAGIIDRGDIVGALAQKLGLRMTDAEIKRIKEEGSYPPGLQLGVIAKSINQ

Sequences:

>Translated_399_residues
MMQTNWRIGSLFGIPLFLDPLWFVILGLATLNFGVAYQEWGTVTAWTAGLIMSLLLFGSVLLHELGHSLAARSQGIKVNS
ITLFLFGGIAAIEEESKTPGKAFQVAIAGPLVSIGLFLLLRLGSTVVSDSSPVSMMVGDLARINLVVALFNLIPGLPLDG
GQVLKAALWQITGDRFQAVHWAAKAGQILGYGAIALGFAVDFFTRELVTGLWIALLGWFGVRNANSYDRVTTLQETLLEV
KAVDAMTRDFRVIDANQTLRSFADSYLLATSNPEVYFAASDGRYRGMVAIEDLRLVERSEWETQTLHSIAHPLTEIPTVA
ESTAIAGVINKLENEQLPRVTVLTPAGAVAGIIDRGDIVGALAQKLGLRMTDAEIKRIKEEGSYPPGLQLGVIAKSINQ
>Mature_399_residues
MMQTNWRIGSLFGIPLFLDPLWFVILGLATLNFGVAYQEWGTVTAWTAGLIMSLLLFGSVLLHELGHSLAARSQGIKVNS
ITLFLFGGIAAIEEESKTPGKAFQVAIAGPLVSIGLFLLLRLGSTVVSDSSPVSMMVGDLARINLVVALFNLIPGLPLDG
GQVLKAALWQITGDRFQAVHWAAKAGQILGYGAIALGFAVDFFTRELVTGLWIALLGWFGVRNANSYDRVTTLQETLLEV
KAVDAMTRDFRVIDANQTLRSFADSYLLATSNPEVYFAASDGRYRGMVAIEDLRLVERSEWETQTLHSIAHPLTEIPTVA
ESTAIAGVINKLENEQLPRVTVLTPAGAVAGIIDRGDIVGALAQKLGLRMTDAEIKRIKEEGSYPPGLQLGVIAKSINQ

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 43106; Mature: 43106

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQTNWRIGSLFGIPLFLDPLWFVILGLATLNFGVAYQEWGTVTAWTAGLIMSLLLFGSV
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHH
LLHELGHSLAARSQGIKVNSITLFLFGGIAAIEEESKTPGKAFQVAIAGPLVSIGLFLLL
HHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
RLGSTVVSDSSPVSMMVGDLARINLVVALFNLIPGLPLDGGQVLKAALWQITGDRFQAVH
HHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
WAAKAGQILGYGAIALGFAVDFFTRELVTGLWIALLGWFGVRNANSYDRVTTLQETLLEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KAVDAMTRDFRVIDANQTLRSFADSYLLATSNPEVYFAASDGRYRGMVAIEDLRLVERSE
HHHHHHHHCCEEEECHHHHHHHHHCEEEEECCCCEEEEECCCCEECEEEEHHHHHHHHCC
WETQTLHSIAHPLTEIPTVAESTAIAGVINKLENEQLPRVTVLTPAGAVAGIIDRGDIVG
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCHHHHH
ALAQKLGLRMTDAEIKRIKEEGSYPPGLQLGVIAKSINQ
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMQTNWRIGSLFGIPLFLDPLWFVILGLATLNFGVAYQEWGTVTAWTAGLIMSLLLFGSV
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHH
LLHELGHSLAARSQGIKVNSITLFLFGGIAAIEEESKTPGKAFQVAIAGPLVSIGLFLLL
HHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHH
RLGSTVVSDSSPVSMMVGDLARINLVVALFNLIPGLPLDGGQVLKAALWQITGDRFQAVH
HHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
WAAKAGQILGYGAIALGFAVDFFTRELVTGLWIALLGWFGVRNANSYDRVTTLQETLLEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KAVDAMTRDFRVIDANQTLRSFADSYLLATSNPEVYFAASDGRYRGMVAIEDLRLVERSE
HHHHHHHHCCEEEECHHHHHHHHHCEEEEECCCCEEEEECCCCEECEEEEHHHHHHHHCC
WETQTLHSIAHPLTEIPTVAESTAIAGVINKLENEQLPRVTVLTPAGAVAGIIDRGDIVG
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCHHHHH
ALAQKLGLRMTDAEIKRIKEEGSYPPGLQLGVIAKSINQ
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]