| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231356
Identifier: 17231356
GI number: 17231356
Start: 4663687
End: 4664877
Strand: Direct
Name: 17231356
Synonym: alr3864
Alternate gene names: NA
Gene position: 4663687-4664877 (Clockwise)
Preceding gene: 17231355
Following gene: 17231359
Centisome position: 72.71
GC content: 47.02
Gene sequence:
>1191_bases ATGCTTGACCTGACGAAATTAGCGCGACAAATGCAGGGTTTAAGTCAGCATCTATCTCTGGAGGCTGTGGCTAGTCGCCA GCGTTTAGAGTTGGCGCAGCAAAATCTGAGAAAGGCTTTCGATTGTCAACAAAATTTAGTAGAACGTCAGGAAAAGTGGC GCGATCGCATTCTCTTTGCTAATGCTACACCCCTAGAGCCACTTAACTCCTGCTTAGATATTCCCGTTCCCCCCAAGGTG CATTCTGTCATCGCTACCGATGGTTCGCAAATTGCCCCCAGTCACCACGAAATTGCTTATTGTTACCTGTTAAATATCGG TAGGGTAGTTTTACACTACGGACAGAATCGCTACCCTTTACTGGATAGTTTGCCAGAGGTATTTTACCGCCCAGAAGATT TATATGCGTCTCGTCAGTGGGGAATTAGAACTGAGGAATGGATGAGTTTCCGCCGCACTGCTAGCGAGGCGATCGTTTTA GCGGAGTTGGCTTGTAGTGTCCATGATACGGGGGCTTCTTCATCTCCCCCGACTCTGGCAATGGTGGATGGTTCCTTAAT TTACTGGTTTTTGGAACAGTTACCCGTAGATGCACGTAACTGTATTTTACCCCCTATATTGGAAGCTTGGGAGCAAATGC GTGCTGCCAAAATTCCTTTGATGGGTTATGTAAGTGCTTCTCGAAATGTGGAAGCGGTGAATTTTTTGCGTTTGATGGCG TGTCCTCATCCTGCGCCTGATTGCGCTAGTTACTGCCCGAATCAACTAGAAAAAGTGCCATGTAAGGTGTTTGACCCTTT GCGGGATACAGCATTGTGGACAACTCAACTCCAGCCAGGACAACGGGGGCCTTTGTGGCGGAGTAATGCCCGGATTTTAG ACCTTTATGAAGACCAAGCTATATACTTTTGCTACGTCCATGTTGGTACAGAAATTGCGCGGATAGAAGTACCTGCCTGG GTAGCTAAAGATACAGAGATGTTTGACCAAGCATTAGGGCTGATGTTGGCACAGGTGCAGAAAGGATATGGTTATCCAGT GGCGATCGCCGAAGCGCATAATCAAGCAGTAGTCAGGGGCGGTGATAAAACCCGTTTCTTTGCTCTACTGGAAAAACAAA TGATTAAAGCTGGGTTGAAAAATGTCGGGACTTCTTACAAAGAAGCGAGGAAGCGAGGTAGTATTGCGTAA
Upstream 100 bases:
>100_bases AGGGGTGTAAGGGAGCAGGGGAAGTAAGGAAGAATAACTATGGACTGTTGAGTAATGAGTGATGAGTAATGACAACTGAC AACTGACCAATGACTAAAAT
Downstream 100 bases:
>100_bases AGATGGGGTTGACTGTTGACTGTTGACTGATAACTGACTAACCTCCAATTTGTGACATTGTACGGCTGTAGACTCCTGTA GTCCCGGAATCGCGCCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MLDLTKLARQMQGLSQHLSLEAVASRQRLELAQQNLRKAFDCQQNLVERQEKWRDRILFANATPLEPLNSCLDIPVPPKV HSVIATDGSQIAPSHHEIAYCYLLNIGRVVLHYGQNRYPLLDSLPEVFYRPEDLYASRQWGIRTEEWMSFRRTASEAIVL AELACSVHDTGASSSPPTLAMVDGSLIYWFLEQLPVDARNCILPPILEAWEQMRAAKIPLMGYVSASRNVEAVNFLRLMA CPHPAPDCASYCPNQLEKVPCKVFDPLRDTALWTTQLQPGQRGPLWRSNARILDLYEDQAIYFCYVHVGTEIARIEVPAW VAKDTEMFDQALGLMLAQVQKGYGYPVAIAEAHNQAVVRGGDKTRFFALLEKQMIKAGLKNVGTSYKEARKRGSIA
Sequences:
>Translated_396_residues MLDLTKLARQMQGLSQHLSLEAVASRQRLELAQQNLRKAFDCQQNLVERQEKWRDRILFANATPLEPLNSCLDIPVPPKV HSVIATDGSQIAPSHHEIAYCYLLNIGRVVLHYGQNRYPLLDSLPEVFYRPEDLYASRQWGIRTEEWMSFRRTASEAIVL AELACSVHDTGASSSPPTLAMVDGSLIYWFLEQLPVDARNCILPPILEAWEQMRAAKIPLMGYVSASRNVEAVNFLRLMA CPHPAPDCASYCPNQLEKVPCKVFDPLRDTALWTTQLQPGQRGPLWRSNARILDLYEDQAIYFCYVHVGTEIARIEVPAW VAKDTEMFDQALGLMLAQVQKGYGYPVAIAEAHNQAVVRGGDKTRFFALLEKQMIKAGLKNVGTSYKEARKRGSIA >Mature_396_residues MLDLTKLARQMQGLSQHLSLEAVASRQRLELAQQNLRKAFDCQQNLVERQEKWRDRILFANATPLEPLNSCLDIPVPPKV HSVIATDGSQIAPSHHEIAYCYLLNIGRVVLHYGQNRYPLLDSLPEVFYRPEDLYASRQWGIRTEEWMSFRRTASEAIVL AELACSVHDTGASSSPPTLAMVDGSLIYWFLEQLPVDARNCILPPILEAWEQMRAAKIPLMGYVSASRNVEAVNFLRLMA CPHPAPDCASYCPNQLEKVPCKVFDPLRDTALWTTQLQPGQRGPLWRSNARILDLYEDQAIYFCYVHVGTEIARIEVPAW VAKDTEMFDQALGLMLAQVQKGYGYPVAIAEAHNQAVVRGGDKTRFFALLEKQMIKAGLKNVGTSYKEARKRGSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44669; Mature: 44669
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLTKLARQMQGLSQHLSLEAVASRQRLELAQQNLRKAFDCQQNLVERQEKWRDRILFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE NATPLEPLNSCLDIPVPPKVHSVIATDGSQIAPSHHEIAYCYLLNIGRVVLHYGQNRYPL CCCCCHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCH LDSLPEVFYRPEDLYASRQWGIRTEEWMSFRRTASEAIVLAELACSVHDTGASSSPPTLA HHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE MVDGSLIYWFLEQLPVDARNCILPPILEAWEQMRAAKIPLMGYVSASRNVEAVNFLRLMA EECCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH CPHPAPDCASYCPNQLEKVPCKVFDPLRDTALWTTQLQPGQRGPLWRSNARILDLYEDQA CCCCCHHHHHHCCHHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCEEEEEECCCE IYFCYVHVGTEIARIEVPAWVAKDTEMFDQALGLMLAQVQKGYGYPVAIAEAHNQAVVRG EEEEEEEECCEEEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC GDKTRFFALLEKQMIKAGLKNVGTSYKEARKRGSIA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure MLDLTKLARQMQGLSQHLSLEAVASRQRLELAQQNLRKAFDCQQNLVERQEKWRDRILFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE NATPLEPLNSCLDIPVPPKVHSVIATDGSQIAPSHHEIAYCYLLNIGRVVLHYGQNRYPL CCCCCHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCH LDSLPEVFYRPEDLYASRQWGIRTEEWMSFRRTASEAIVLAELACSVHDTGASSSPPTLA HHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE MVDGSLIYWFLEQLPVDARNCILPPILEAWEQMRAAKIPLMGYVSASRNVEAVNFLRLMA EECCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH CPHPAPDCASYCPNQLEKVPCKVFDPLRDTALWTTQLQPGQRGPLWRSNARILDLYEDQA CCCCCHHHHHHCCHHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCEEEEEECCCE IYFCYVHVGTEIARIEVPAWVAKDTEMFDQALGLMLAQVQKGYGYPVAIAEAHNQAVVRG EEEEEEEECCEEEEEECCHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEC GDKTRFFALLEKQMIKAGLKNVGTSYKEARKRGSIA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA