| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231355
Identifier: 17231355
GI number: 17231355
Start: 4662782
End: 4663567
Strand: Direct
Name: 17231355
Synonym: alr3863
Alternate gene names: NA
Gene position: 4662782-4663567 (Clockwise)
Preceding gene: 17231350
Following gene: 17231356
Centisome position: 72.7
GC content: 40.71
Gene sequence:
>786_bases ATGACCGCAAGTAATCCTACAATTTTAGCCCTGGATTTTGATGGGGTAATTTGTGATGGACTAATCGAATATTTTGAAGT AGCTTGGCGCACCTACTGTCAAATTTGGTCGCCTGCTGAGAACACACCACCAGATGATTTGGCTTTGAGGTTTTATCGAC TCCGACCTGTAATTGAAACAGGTTGGGAAATGCCTGTTTTAATCAAAGCTTTAGTAGATGGAAATTCTGATGACCAGATT CTTCAGGAATGGACAAGCATTACCCCCAAGATTTTATTAGATGACAAGCTACAAGCAAAAGAAATTGCTACGAAATTAGA TGGCTTGCGTGATGAGTGGATTGCTAACGATTTAGATGGTTGGTTGAGTCTGCATAGATTTTATCAGGGTGTAATTGAAA AACTGAAAATCGCTGTTGCCAGTGAAGTCAAGCTATATATTGTGACTACCAAAGAAGGACGCTTTGTAGAGCAGTTGTTG CATCAGGAAGGTGTAGATTTACCACGAGATGCAATTTTTGGTAAAGAAGTCAAGCGTCCTAAGTATGAAATTATCCGCGA ATTAATTCAAGCAGCAGACCATGAACCAGTGAGTTTATGGTTTGTAGAAGACAGAATCAAAACATTACAGCTCGTTCAAC AGCAGTCAGACCTTGAAGATGTCAAGCTTTTCTTGGCAGACTGGGGCTATAATACCCAATCAGAGAGAAAAGCAGCCCAA AGTGATCCGCGAATTCAACTATTATCCCTGTCTCAGTTTGCTAAAGATTTTCCTGGGTGGGTGTGA
Upstream 100 bases:
>100_bases CCCTACACCCCCACACCCCTAAAGCTAATCGCTTCCGTGATTACAGAAAATAAATACTGAATCAGTTAAGCTGGCAAAAG CAGTATTCATTTTCTAAACA
Downstream 100 bases:
>100_bases GAAAGGGGTGTAAGGGTGTAGGGGTGTAAGGGAGCAGGGGAAGTAAGGAAGAATAACTATGGACTGTTGAGTAATGAGTG ATGAGTAATGACAACTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQI LQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLL HQEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ SDPRIQLLSLSQFAKDFPGWV
Sequences:
>Translated_261_residues MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQI LQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLL HQEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ SDPRIQLLSLSQFAKDFPGWV >Mature_260_residues TASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIETGWEMPVLIKALVDGNSDDQIL QEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDGWLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLH QEGVDLPRDAIFGKEVKRPKYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQS DPRIQLLSLSQFAKDFPGWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30077; Mature: 29945
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIET CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GWEMPVLIKALVDGNSDDQILQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDG CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH WLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLHQEGVDLPRDAIFGKEVKRP HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHCCC KYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHC SDPRIQLLSLSQFAKDFPGWV CCCCEEEEHHHHHHHHCCCCC >Mature Secondary Structure TASNPTILALDFDGVICDGLIEYFEVAWRTYCQIWSPAENTPPDDLALRFYRLRPVIET CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GWEMPVLIKALVDGNSDDQILQEWTSITPKILLDDKLQAKEIATKLDGLRDEWIANDLDG CCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHH WLSLHRFYQGVIEKLKIAVASEVKLYIVTTKEGRFVEQLLHQEGVDLPRDAIFGKEVKRP HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHCCC KYEIIRELIQAADHEPVSLWFVEDRIKTLQLVQQQSDLEDVKLFLADWGYNTQSERKAAQ HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHC SDPRIQLLSLSQFAKDFPGWV CCCCEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA