| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231327
Identifier: 17231327
GI number: 17231327
Start: 4634485
End: 4635015
Strand: Reverse
Name: 17231327
Synonym: all3835
Alternate gene names: NA
Gene position: 4635015-4634485 (Counterclockwise)
Preceding gene: 17231328
Following gene: 17231318
Centisome position: 72.27
GC content: 40.87
Gene sequence:
>531_bases ATGAGTCTTATCAGGCTGTATCGCACCTCAATATTGGTAGTGAGTGTCTGCATCCTACTGGCTAGCAACTCTGCTTTAGC TGCTGAAAGAGTAGTACTGAAGTACAAGGTCTTCCGTGAAACTATTGTTGTAGAAGAATTGTCAACCTTTGCTCAAACTG GCGCACTCTCAAGTTCACTACGAATTAATTTAGCTTTGGCTCGACAAAACCCTAAAGTAATTCGTCAATATTTAACAACA CCAATCAAAGTCAGCCCTGTACTTTTAGATCGGGTTTTAAACAGTCCTGTTGGTAACATTATTCTTGATGAGCTAAGTCA AGTTATCCACACACCATCCCGCAGTGCTGATAGACAAGCTTTGCGTTCCGCTTTGGTACTTTCCGCTAGTGGTGATGGAC AAGTGACTTTAATAGAAATCATCCAAAATTATCCTACTCCAAACGTAGAAATTGACGGAGAGCGTTTGGGGGATGCTTAC CGTCAACTTCGTAGCTTACAAGCTAGGTTAGAGAATTTATTCAGTTTTTAA
Upstream 100 bases:
>100_bases TCACGGGACAAACTTTGTTTGTAGATGGTGGTCTGTCGCTGTACGCTGACTTTAGAGAACCTTGGTCAGCTTGAGTTCCC AGTATAGAACTTCAGAAAAT
Downstream 100 bases:
>100_bases TAAGCTAAAGTTTCTAAAGTTTCCCGCAAATAACGTTGTACTTGCTGTTCTAAACGCAATTCCTTAAGTTGAATATTACT TTCTAGCTGCCAACGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYKVFRETIVVEELSTFAQTGALSSSLRINLALARQNPKVIRQYLTT PIKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALVLSASGDGQVTLIEIIQNYPTPNVEIDGERLGDAY RQLRSLQARLENLFSF
Sequences:
>Translated_176_residues MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYKVFRETIVVEELSTFAQTGALSSSLRINLALARQNPKVIRQYLTT PIKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALVLSASGDGQVTLIEIIQNYPTPNVEIDGERLGDAY RQLRSLQARLENLFSF >Mature_175_residues SLIRLYRTSILVVSVCILLASNSALAAERVVLKYKVFRETIVVEELSTFAQTGALSSSLRINLALARQNPKVIRQYLTTP IKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQALRSALVLSASGDGQVTLIEIIQNYPTPNVEIDGERLGDAYR QLRSLQARLENLFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19475; Mature: 19344
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIRLYRTSILVVSVCILLASNSALAAERVVLKYKVFRETIVVEELSTFAQTGALSSSL CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RINLALARQNPKVIRQYLTTPIKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQA EEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH LRSALVLSASGDGQVTLIEIIQNYPTPNVEIDGERLGDAYRQLRSLQARLENLFSF HHHHHHEECCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIRLYRTSILVVSVCILLASNSALAAERVVLKYKVFRETIVVEELSTFAQTGALSSSL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RINLALARQNPKVIRQYLTTPIKVSPVLLDRVLNSPVGNIILDELSQVIHTPSRSADRQA EEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH LRSALVLSASGDGQVTLIEIIQNYPTPNVEIDGERLGDAYRQLRSLQARLENLFSF HHHHHHEECCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA