Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231318

Identifier: 17231318

GI number: 17231318

Start: 4624996

End: 4625721

Strand: Reverse

Name: 17231318

Synonym: all3826

Alternate gene names: NA

Gene position: 4625721-4624996 (Counterclockwise)

Preceding gene: 17231327

Following gene: 17231314

Centisome position: 72.12

GC content: 44.21

Gene sequence:

>726_bases
ATGTGGTGTGGGTTTGGAAAATCAAGTGCAGTAATTGCTACAGCTTGTGTAATTAGTGCTAGTTTTGTAATTTCAAATAC
AACTTTTGCAGATCGTCAGCGTAATTATACGCCACAGGAATTTCGTACAGTTTTACGAGGTTTAGGCTATAACGTCAAGG
TGACAAACACGCCTCTCAGCGACGCAGAAACTAAAAAAGCTATCAGTGAATTTCAAAAAGGTTACAAGCTTACCCCAGTT
GATGGGATTGCAGGGCCAAAAACCCAAGACTTTGCTGCAAATATCGTTCAAATCTTGCAAGCAAACTTAAATGCAGTCCT
AAAAACAAATCCCCCTTTACCTCGTGATCAATTTTACGGCCCCAAAACTGAAGCAGCTATTAAAGAATTTCAGAAAAAAC
ATCAGCTAGAAGCAACTGGTATTGCTAATTTAGCTCTTCGTCAAAAGTTGGACGAAGAAGCCAAAAAAGTCATCAGTAAA
CCGAGTACTCAACCAACGGTGAAGCCGTCGCCATCACCGACAGCCAAACCTACAGCATCACCGACAGCTAAACCAGCAGC
ATCGCCAACATCTAAACCTACAACATCACCTGCGCCAACGAAATCGCCGGCAACTACACCAACAGTATCACCCTCACCAA
CGGAATCGCCAACAGCTAAACCGGAGGCATCACCCTCGCCAACGGAATCACCCTCACCAACAGCATCGCCGACAACTACA
CCTTAA

Upstream 100 bases:

>100_bases
AAAATTATGAACAACTTAGACAAATACTGTAAAGCAAAGTAAAATTGTCCTCTTGTTTACGTCTATCAATTTTTTGGTTT
AACTCAAAGGAGTTTTAAAT

Downstream 100 bases:

>100_bases
ATAACGCTAAAAACCCCCTATACCCAAACCTCAGTTCTTTTGATTTGGTTCTTCGAGGGGTCTACCTTTTGGTATAGGTA
AGATTGGACGGCGATCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV
DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK
PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT
P

Sequences:

>Translated_241_residues
MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV
DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK
PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT
P
>Mature_241_residues
MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLSDAETKKAISEFQKGYKLTPV
DGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK
PSTQPTVKPSPSPTAKPTASPTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT
P

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25429; Mature: 25429

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLS
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC
DAETKKAISEFQKGYKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
PKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISKPSTQPTVKPSPSPTAKPTAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
P
C
>Mature Secondary Structure
MWCGFGKSSAVIATACVISASFVISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPLS
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC
DAETKKAISEFQKGYKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
PKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISKPSTQPTVKPSPSPTAKPTAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PTAKPAASPTSKPTTSPAPTKSPATTPTVSPSPTESPTAKPEASPSPTESPSPTASPTTT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA