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The map label for this gene is 17231250

Identifier: 17231250

GI number: 17231250

Start: 4540251

End: 4540589

Strand: Direct

Name: 17231250

Synonym: alr3758

Alternate gene names: NA

Gene position: 4540251-4540589 (Clockwise)

Preceding gene: 17231249

Following gene: 17231252

Centisome position: 70.79

GC content: 35.1

Gene sequence:

>339_bases
ATGAATACAAACTTTCAAGTCATAGAAGTATCGGGTATTTTAGATGGAATTAGGGGTAATCAACTACGTCGTGAAATTAG
CGAATTGATTGCTGATGGTAACAATATTGTGTTGCTGGACATGAATTCAGTGACTTTTATGGATAGTTCTGGCTTAGGCT
CTTTAGTATCGGCAATGCAAATGCTACGTTCTGTTAATTCCCAACTTTTTATCTGCTCTATGAATGACCAAGTTAAGATG
TTGTTTGAATTAACTAAAATGAATAGGATTTTTCAAACCTTTATCGATCAAGATGACTTTAAACGGCAAGTACTGACAGC
CACAAGGGTTATTTCCTAA

Upstream 100 bases:

>100_bases
ACCTTGCCGTTTCAATATAATAATGCCAGAATGTATAAAACAATAATTAAATAGCAAACCGATAGTAATCTAACAATTTA
TTTAAAGAAAAAAACAGCTT

Downstream 100 bases:

>100_bases
TTAAAAAGAATCAATATAACTCTATTAACCCAAAGTAATTTTTAATAATGACAAATCATCTTCAATTATTTGTTGAATAT
TTAATGTCATTATTTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Anti-Sigma Factor Antagonist; STAS Domain-Containing Protein; Anti-Anti-Sigma Factor

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNTNFQVIEVSGILDGIRGNQLRREISELIADGNNIVLLDMNSVTFMDSSGLGSLVSAMQMLRSVNSQLFICSMNDQVKM
LFELTKMNRIFQTFIDQDDFKRQVLTATRVIS

Sequences:

>Translated_112_residues
MNTNFQVIEVSGILDGIRGNQLRREISELIADGNNIVLLDMNSVTFMDSSGLGSLVSAMQMLRSVNSQLFICSMNDQVKM
LFELTKMNRIFQTFIDQDDFKRQVLTATRVIS
>Mature_112_residues
MNTNFQVIEVSGILDGIRGNQLRREISELIADGNNIVLLDMNSVTFMDSSGLGSLVSAMQMLRSVNSQLFICSMNDQVKM
LFELTKMNRIFQTFIDQDDFKRQVLTATRVIS

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12670; Mature: 12670

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNFQVIEVSGILDGIRGNQLRREISELIADGNNIVLLDMNSVTFMDSSGLGSLVSAMQ
CCCCEEEEEECCHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHH
MLRSVNSQLFICSMNDQVKMLFELTKMNRIFQTFIDQDDFKRQVLTATRVIS
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTNFQVIEVSGILDGIRGNQLRREISELIADGNNIVLLDMNSVTFMDSSGLGSLVSAMQ
CCCCEEEEEECCHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHH
MLRSVNSQLFICSMNDQVKMLFELTKMNRIFQTFIDQDDFKRQVLTATRVIS
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA