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The map label for this gene is yjcF [C]

Identifier: 17231232

GI number: 17231232

Start: 4516268

End: 4516981

Strand: Reverse

Name: yjcF [C]

Synonym: all3740

Alternate gene names: 17231232

Gene position: 4516981-4516268 (Counterclockwise)

Preceding gene: 17231233

Following gene: 17231228

Centisome position: 70.43

GC content: 45.52

Gene sequence:

>714_bases
ATGAATGTGGGTGAAATTCTGAGACATTATGCTGCTGGCAAACGCAACTTTCAGCATATCAATCTGCAAGAAATAGAGTT
AACAAATGCAAGCCTCACAGGTGCAGATTTGAGCTACGCCGATTTACGTCAGACGCGACTTGGTAAGAGCAACTTCAGCC
ACACCTGTTTACGAGAAGCAGATTTGAGCGAAGCCATTCTCTGGGGAATAGATTTGAGTGAAGCAGATTTGTATCGCGCC
ATCCTCCGCGAAGCAGATTTAACAGGTGCAAAGTTAGTCAAGACTCGTTTGGAAGAAGCGAACTTAATCAAGGCTAGTTT
ATGCGGTGCTAATTTGAATAGTGCCAATCTCTCTCGGTGTTTACTCTTTCAAGCAGATTTACGTCCCAGTTCCAACCAGC
GCACAGATTTGGGCTATGTGCTGTTAACTGGGGCAGATTTAAGCTACGCTGACCTGAGAGCGGCTTCTCTACATCACGCC
AATTTAGACGGTGCAAAGCTGTGTCGGGCAAATTTTGGTCGGACAATTCAGTGGGGAAATCTAGCGGCGGATTTGAGTGG
GGCTAGCTTGCAAGGTGCAGACTTGAGTTACGCAAATTTGGAAAGTGCCATTTTGCGAAAAGCAAATCTGCAAGGAGCAG
ACTTAACAGGAGCAATTCTGAAAGATGCTGAACTAAAGGGAGCCATTATGCCTGATGGTTCAATTCATGATTGA

Upstream 100 bases:

>100_bases
AGACAGGGACATCTGCACAAGCTAAGAATCAGAAGAAAAGAAATTTAAAGAGTTGGTATCATACCCTTTAAATTTATTAA
TTATTTAATTTGAATTATTT

Downstream 100 bases:

>100_bases
GATTTTACAGGATTCCTGGGAAAAGGGGATTTTTTAAACGCAGAGGAAGGCGGTAGACGCTTTTGCGGCAAGCCGCAGGC
TGGGTAGCGCGGAGGTACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEADLYRA
ILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHA
NLDGAKLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIHD

Sequences:

>Translated_237_residues
MNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEADLYRA
ILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHA
NLDGAKLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIHD
>Mature_237_residues
MNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAILWGIDLSEADLYRA
ILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHA
NLDGAKLCRANFGRTIQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Drosophila melanogaster, GI221377802, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 25577; Mature: 25577

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREA
CCHHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHC
DLSEAILWGIDLSEADLYRAILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRC
CCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCEE
LLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGAKLCRANFGRTIQWGN
EEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCC
LAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIHD
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure
MNVGEILRHYAAGKRNFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREA
CCHHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHC
DLSEAILWGIDLSEADLYRAILREADLTGAKLVKTRLEEANLIKASLCGANLNSANLSRC
CCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCEE
LLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLDGAKLCRANFGRTIQWGN
EEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCC
LAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIHD
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA