| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231228
Identifier: 17231228
GI number: 17231228
Start: 4511888
End: 4513216
Strand: Reverse
Name: 17231228
Synonym: all3736
Alternate gene names: NA
Gene position: 4513216-4511888 (Counterclockwise)
Preceding gene: 17231232
Following gene: 17231227
Centisome position: 70.37
GC content: 36.34
Gene sequence:
>1329_bases GTGGATGAGATATTAGAGCGATCGCACGAACTTAAACAAGCCTTAGTGGATTTTGTGCTGGATGCGGAGGGTGACATAGC CCAAGCATTAGAAACCTATGCAGCAGAACGGTTACGCCGTGGTAGTGGGGATAATACACAGCAAGACTTAACCATTGATA GTTTTCTGATTGAGGGAAAAGTTGGTGATGAGTCGCCACTAAATTTATTTATTGCTAGTCAGGAAGATTTAACAGAGAGC GATCGTCATCTTCTCAACAGTTGGCATCGTAGTTTTATGGGTTTATTTGCTATTACTCAAATTTTACCTGATGGTTTAGA ATTACTCAATTGGTTAACGAATAAATCTTATATTATTAAGCCCAATAATTCCCAAGTATTACAAGCAATTGAACGATTAA AAATAGGCGAGATTTTACTAGCTCGTATCTCTCCTGTTACCGATAATTATTGGACATTTTCTAGCCCATATACATTATTA GGTAAATTGGGTAAACCAAAATTAGCTGTAGCCATTGGTAATTTTAAAGAAAACTATAAGCATCATCTTTATAGTGATGC GCCTGATGTCCTAGAATCTGCTTGGAATTCTGTATATCAATATCATCAGGATTTTCTTGACTTCTTTGGCAGTGATGAAA TTACTCTACCTGGATATCAACTGAATAAAAAAATTGCTGAGTTTCAAGAATTAATTACAGAGAAACGTTTGGCATCTTTA GGAATTGACCAGACAAAATCTCTAAGTGAATTAGGCATAGAAGCTGGTGTTCAAGAAGAGGATATTCAAGCCGCAGTTAA AGAAACTGGTGCAGATGCCAAGATAGTTTCCCAGGTATTGAATAATAAAAGTGGTAACACCAAAATGGTGATGCCAAAAG TTGATTTACCTGCGGAACTGAAAAAAGCCGAACAAGTAACAGCTATTTCTCATCCCCGTTGGGGACAAATGTTTTTACCA ACATATAGTAAATTCCAATCTTTATTATCAGCAGAAGATTGGCAAAATGTTGATGGGGCTGAGAAACTAGTTCGTTATTA TCTGGAAAATAAAAGTATTAATGCGTTTATTTGGGATCGTTTAGCCGAACAGTATCCAAGTTCCTTGGAAAAAGTTTTAC AAACTGTGCTACAACGTCCAGATTTTAATATTAGTAATGATTTGAATGCTCTTTTACAAGAGTTTAATAAACCTTTAGAG CCAGATTTGCCGGATATTGCTAGTGTGCCGATACATCTGCATGAATTATTTCAGGAAGCGGTTGCAGAAGTCCACAAATC TAAGCCAAAAGGTAAGATACCGAAAAAGGTAGATAAGGGTTTTAAATAG
Upstream 100 bases:
>100_bases AACTTTCTAAATATATATTTTTACAAATCTAGCTATTGCTAGATGCTGTCATTCTCTGGAAAAGCTTAATCTACAACTGT TACACTCTAGAAATAGACCT
Downstream 100 bases:
>100_bases ACAAATGCTATCTTAAAAACAAAATCATTTGCTCAGATTTGAGGAAACCCTTATGACTACCACACTCTTAGAATCTAATT CTATCGAGTCATTGCTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MDEILERSHELKQALVDFVLDAEGDIAQALETYAAERLRRGSGDNTQQDLTIDSFLIEGKVGDESPLNLFIASQEDLTES DRHLLNSWHRSFMGLFAITQILPDGLELLNWLTNKSYIIKPNNSQVLQAIERLKIGEILLARISPVTDNYWTFSSPYTLL GKLGKPKLAVAIGNFKENYKHHLYSDAPDVLESAWNSVYQYHQDFLDFFGSDEITLPGYQLNKKIAEFQELITEKRLASL GIDQTKSLSELGIEAGVQEEDIQAAVKETGADAKIVSQVLNNKSGNTKMVMPKVDLPAELKKAEQVTAISHPRWGQMFLP TYSKFQSLLSAEDWQNVDGAEKLVRYYLENKSINAFIWDRLAEQYPSSLEKVLQTVLQRPDFNISNDLNALLQEFNKPLE PDLPDIASVPIHLHELFQEAVAEVHKSKPKGKIPKKVDKGFK
Sequences:
>Translated_442_residues MDEILERSHELKQALVDFVLDAEGDIAQALETYAAERLRRGSGDNTQQDLTIDSFLIEGKVGDESPLNLFIASQEDLTES DRHLLNSWHRSFMGLFAITQILPDGLELLNWLTNKSYIIKPNNSQVLQAIERLKIGEILLARISPVTDNYWTFSSPYTLL GKLGKPKLAVAIGNFKENYKHHLYSDAPDVLESAWNSVYQYHQDFLDFFGSDEITLPGYQLNKKIAEFQELITEKRLASL GIDQTKSLSELGIEAGVQEEDIQAAVKETGADAKIVSQVLNNKSGNTKMVMPKVDLPAELKKAEQVTAISHPRWGQMFLP TYSKFQSLLSAEDWQNVDGAEKLVRYYLENKSINAFIWDRLAEQYPSSLEKVLQTVLQRPDFNISNDLNALLQEFNKPLE PDLPDIASVPIHLHELFQEAVAEVHKSKPKGKIPKKVDKGFK >Mature_442_residues MDEILERSHELKQALVDFVLDAEGDIAQALETYAAERLRRGSGDNTQQDLTIDSFLIEGKVGDESPLNLFIASQEDLTES DRHLLNSWHRSFMGLFAITQILPDGLELLNWLTNKSYIIKPNNSQVLQAIERLKIGEILLARISPVTDNYWTFSSPYTLL GKLGKPKLAVAIGNFKENYKHHLYSDAPDVLESAWNSVYQYHQDFLDFFGSDEITLPGYQLNKKIAEFQELITEKRLASL GIDQTKSLSELGIEAGVQEEDIQAAVKETGADAKIVSQVLNNKSGNTKMVMPKVDLPAELKKAEQVTAISHPRWGQMFLP TYSKFQSLLSAEDWQNVDGAEKLVRYYLENKSINAFIWDRLAEQYPSSLEKVLQTVLQRPDFNISNDLNALLQEFNKPLE PDLPDIASVPIHLHELFQEAVAEVHKSKPKGKIPKKVDKGFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49970; Mature: 49970
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEILERSHELKQALVDFVLDAEGDIAQALETYAAERLRRGSGDNTQQDLTIDSFLIEGK CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECC VGDESPLNLFIASQEDLTESDRHLLNSWHRSFMGLFAITQILPDGLELLNWLTNKSYIIK CCCCCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PNNSQVLQAIERLKIGEILLARISPVTDNYWTFSSPYTLLGKLGKPKLAVAIGNFKENYK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCCCCEEEEECCHHHHHH HHLYSDAPDVLESAWNSVYQYHQDFLDFFGSDEITLPGYQLNKKIAEFQELITEKRLASL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHC GIDQTKSLSELGIEAGVQEEDIQAAVKETGADAKIVSQVLNNKSGNTKMVMPKVDLPAEL CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHH KKAEQVTAISHPRWGQMFLPTYSKFQSLLSAEDWQNVDGAEKLVRYYLENKSINAFIWDR HHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH LAEQYPSSLEKVLQTVLQRPDFNISNDLNALLQEFNKPLEPDLPDIASVPIHLHELFQEA HHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHH VAEVHKSKPKGKIPKKVDKGFK HHHHHHCCCCCCCCHHHCCCCC >Mature Secondary Structure MDEILERSHELKQALVDFVLDAEGDIAQALETYAAERLRRGSGDNTQQDLTIDSFLIEGK CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECC VGDESPLNLFIASQEDLTESDRHLLNSWHRSFMGLFAITQILPDGLELLNWLTNKSYIIK CCCCCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PNNSQVLQAIERLKIGEILLARISPVTDNYWTFSSPYTLLGKLGKPKLAVAIGNFKENYK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCCCCEEEEECCHHHHHH HHLYSDAPDVLESAWNSVYQYHQDFLDFFGSDEITLPGYQLNKKIAEFQELITEKRLASL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHC GIDQTKSLSELGIEAGVQEEDIQAAVKETGADAKIVSQVLNNKSGNTKMVMPKVDLPAEL CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHH KKAEQVTAISHPRWGQMFLPTYSKFQSLLSAEDWQNVDGAEKLVRYYLENKSINAFIWDR HHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH LAEQYPSSLEKVLQTVLQRPDFNISNDLNALLQEFNKPLEPDLPDIASVPIHLHELFQEA HHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHH VAEVHKSKPKGKIPKKVDKGFK HHHHHHCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA