| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231186
Identifier: 17231186
GI number: 17231186
Start: 4461464
End: 4461631
Strand: Direct
Name: 17231186
Synonym: asr3694
Alternate gene names: NA
Gene position: 4461464-4461631 (Clockwise)
Preceding gene: 17231185
Following gene: 17231190
Centisome position: 69.56
GC content: 42.86
Gene sequence:
>168_bases ATGGCGGTAGATTTAGACAAACGTTTAGTCTTAATTTTGCAAAGTTTCCCCCACCTTCGCTCTTGGGAGCGTAACGGTTT ATGGGAAGTATCATTCCGGCGAAGAATTAAAGAACATACTCATGTAAGTATGGTTGCGCCAGAGATTGAGTTAGTGATTC CCGGATGA
Upstream 100 bases:
>100_bases TTTTACATTTCATCCAGAAACTAAACTTAAGCTTTTACGTTCCCTCAACCAAAAACAAATTTGGCAAGCGTTTGAACTAT TGTTAGAATTGCCCCAATTT
Downstream 100 bases:
>100_bases AGCAGACTGTTAACTCAAGGCCTCGAATTGTTGCCAACACAGATACAAAGCACGGGGTACATGAAAACATCCCTTCCATT TACCGCCTTTGAGATTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAVDLDKRLVLILQSFPHLRSWERNGLWEVSFRRRIKEHTHVSMVAPEIELVIPG
Sequences:
>Translated_55_residues MAVDLDKRLVLILQSFPHLRSWERNGLWEVSFRRRIKEHTHVSMVAPEIELVIPG >Mature_54_residues AVDLDKRLVLILQSFPHLRSWERNGLWEVSFRRRIKEHTHVSMVAPEIELVIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6507; Mature: 6376
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDLDKRLVLILQSFPHLRSWERNGLWEVSFRRRIKEHTHVSMVAPEIELVIPG CCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECCEEEEEECC >Mature Secondary Structure AVDLDKRLVLILQSFPHLRSWERNGLWEVSFRRRIKEHTHVSMVAPEIELVIPG CCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA