| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231148
Identifier: 17231148
GI number: 17231148
Start: 4412038
End: 4412334
Strand: Reverse
Name: 17231148
Synonym: asl3656
Alternate gene names: NA
Gene position: 4412334-4412038 (Counterclockwise)
Preceding gene: 17231152
Following gene: 17231145
Centisome position: 68.79
GC content: 46.8
Gene sequence:
>297_bases ATGTCTCAACCCAGCCAGCTTTCTAAAACCAGTCAAATCAATGAATTTAGCGATTTGGAACTAGCCCAAGCCCTTATGGA ACGGCTGAGTATTTCACCCGACGATTGGCATCGCCTCAAGTCTAACCGCAATTCTCGCGCCAGTGAACAATTAGCCGCCG CTATGGTATTTTTACTCAAAAACCAACCCCAGGAAGCTCTTGCTAGACTAGAACAAGCTGTTGGTTGGTTAAATCGTTCA ATATCTGCCCCTCCCTGTCCTTCTCATGGAAATAAGGGACTAGGGACTGGAGAGTAG
Upstream 100 bases:
>100_bases TCATGGACAAGTAGTAAACTAGGATTAACAGCGAGTCTGCCAATATTTAGGGAGTCATTAGACTCAGCACCCAGCACTCA TTACTCAGCACTTGTCAATT
Downstream 100 bases:
>100_bases GGACTGGGATAATTTACCCAGTACCCGGTCTCCAATACCCATTCCCTTAATTATCGCCGCAGAGATAGACGGGGGCGGCT TTCCATTTGTTTACATAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSQPSQLSKTSQINEFSDLELAQALMERLSISPDDWHRLKSNRNSRASEQLAAAMVFLLKNQPQEALARLEQAVGWLNRS ISAPPCPSHGNKGLGTGE
Sequences:
>Translated_98_residues MSQPSQLSKTSQINEFSDLELAQALMERLSISPDDWHRLKSNRNSRASEQLAAAMVFLLKNQPQEALARLEQAVGWLNRS ISAPPCPSHGNKGLGTGE >Mature_97_residues SQPSQLSKTSQINEFSDLELAQALMERLSISPDDWHRLKSNRNSRASEQLAAAMVFLLKNQPQEALARLEQAVGWLNRSI SAPPCPSHGNKGLGTGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10786; Mature: 10655
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPSQLSKTSQINEFSDLELAQALMERLSISPDDWHRLKSNRNSRASEQLAAAMVFLLK CCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC NQPQEALARLEQAVGWLNRSISAPPCPSHGNKGLGTGE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQPSQLSKTSQINEFSDLELAQALMERLSISPDDWHRLKSNRNSRASEQLAAAMVFLLK CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC NQPQEALARLEQAVGWLNRSISAPPCPSHGNKGLGTGE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA