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The map label for this gene is uidR [C]

Identifier: 17231138

GI number: 17231138

Start: 4399520

End: 4400122

Strand: Direct

Name: uidR [C]

Synonym: alr3646

Alternate gene names: 17231138

Gene position: 4399520-4400122 (Clockwise)

Preceding gene: 17231137

Following gene: 17231139

Centisome position: 68.59

GC content: 34.83

Gene sequence:

>603_bases
ATGCCTAAGATTGTTGATCATGACCAATATCGGAAAGAACTGCTCAGTAAATGCTTTGATTTATTTGCTGAAAAAGGTTA
CGGTTCCATCACCATGCGGCAAATTGCTCAAGGTTTGAATGTTTCTACAGGTACGCTGTACCATTACTTTCCTAGTAAAC
AAACGTTGTTTGAGCAATTAGTAGAAGAAATAAGTCAACAAGATGTGAGTGCAGCATTAGCTGAGATGGATGGAGCCAAA
ACGATAGAAGAGGCGATGACAGCCTTAGGTAGATATTTGATTAAGCATGAAGATTACTGTATTAAATGGACGTATGTTTG
GGTAGATTTTTGCCAAAGTCAAGATGTAGAAGAAGTACAGAAAAATATTGTATTTAAACGAGTTAATCAACGTTATCAGC
AAGCCGTTTGTGATTTTTTAGGCATTCAAGATACAGTGATAGCGACCTTTGTTTTGAGCTTGATTAATGGCTTGATTTTA
GAAAAACTCTGGTGTAACCAGACAATTGATTTTCAAGAACAATGTGCTTTGTTAGGGAAAATGCTGACACTTTATTTAAA
AAATAATCAAACAAATAAAATGGCTAACTCTTATCTTAATTGA

Upstream 100 bases:

>100_bases
CCTGCAACCAAAAATAAAGCACTTGAAACCTAGCACTTGACGAGCAGGTAAAAACGTATATTATTAAATAACGAGCGTTC
GATATAAATAATCCGTAATT

Downstream 100 bases:

>100_bases
TTTCATTGATCGGTTAAATTAACTTATTTTGTGAGGAGAAGATGAATCAAAAACTGTTATTTAAGCCTGCTAATCAAGGG
GTAATTGCATTAGTGATTGC

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPKIVDHDQYRKELLSKCFDLFAEKGYGSITMRQIAQGLNVSTGTLYHYFPSKQTLFEQLVEEISQQDVSAALAEMDGAK
TIEEAMTALGRYLIKHEDYCIKWTYVWVDFCQSQDVEEVQKNIVFKRVNQRYQQAVCDFLGIQDTVIATFVLSLINGLIL
EKLWCNQTIDFQEQCALLGKMLTLYLKNNQTNKMANSYLN

Sequences:

>Translated_200_residues
MPKIVDHDQYRKELLSKCFDLFAEKGYGSITMRQIAQGLNVSTGTLYHYFPSKQTLFEQLVEEISQQDVSAALAEMDGAK
TIEEAMTALGRYLIKHEDYCIKWTYVWVDFCQSQDVEEVQKNIVFKRVNQRYQQAVCDFLGIQDTVIATFVLSLINGLIL
EKLWCNQTIDFQEQCALLGKMLTLYLKNNQTNKMANSYLN
>Mature_199_residues
PKIVDHDQYRKELLSKCFDLFAEKGYGSITMRQIAQGLNVSTGTLYHYFPSKQTLFEQLVEEISQQDVSAALAEMDGAKT
IEEAMTALGRYLIKHEDYCIKWTYVWVDFCQSQDVEEVQKNIVFKRVNQRYQQAVCDFLGIQDTVIATFVLSLINGLILE
KLWCNQTIDFQEQCALLGKMLTLYLKNNQTNKMANSYLN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23125; Mature: 22994

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVDHDQYRKELLSKCFDLFAEKGYGSITMRQIAQGLNVSTGTLYHYFPSKQTLFEQL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHH
VEEISQQDVSAALAEMDGAKTIEEAMTALGRYLIKHEDYCIKWTYVWVDFCQSQDVEEVQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHH
KNIVFKRVNQRYQQAVCDFLGIQDTVIATFVLSLINGLILEKLWCNQTIDFQEQCALLGK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MLTLYLKNNQTNKMANSYLN
HHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
PKIVDHDQYRKELLSKCFDLFAEKGYGSITMRQIAQGLNVSTGTLYHYFPSKQTLFEQL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHH
VEEISQQDVSAALAEMDGAKTIEEAMTALGRYLIKHEDYCIKWTYVWVDFCQSQDVEEVQ
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHH
KNIVFKRVNQRYQQAVCDFLGIQDTVIATFVLSLINGLILEKLWCNQTIDFQEQCALLGK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MLTLYLKNNQTNKMANSYLN
HHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA