| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231137
Identifier: 17231137
GI number: 17231137
Start: 4398743
End: 4399087
Strand: Direct
Name: 17231137
Synonym: alr3645
Alternate gene names: NA
Gene position: 4398743-4399087 (Clockwise)
Preceding gene: 17231136
Following gene: 17231138
Centisome position: 68.58
GC content: 38.26
Gene sequence:
>345_bases ATGGATAAATTAACCGATTATCCTAAATTAATTCAGCGCATTTTGTCTGAATATATAGAACTGAGTAACCGCCGTTCAAA CCCAGATATTGAAACATTTTTGATTGTGGATGAATCTAAAGCTCAATATATTTGGATGAATCTCGGTTGGCAAAATGGCG AGCGTGTTACTGGTATGACGGTCTATGTGCGGATTCGTGATGGTAAGTTTTGGATCGAAGAAGATTGGACTGAAGATGGG ATCGCAACTGATCTAGTTCGTTTAGGTGTTCCTAAAGAAGACATTGTGCTAGCATTCCATGAGCCTAGTATCAGAAAGTA TACAGATTTTGCTGTAGTTTCATGA
Upstream 100 bases:
>100_bases CATACAACTTCTTCTTTATTCAGGATGTAACTCAACTTATTCTCAATAAACATCAACTTCCAATTATTGTTGTAAATTTA GAGACAGAGGAGATTACACG
Downstream 100 bases:
>100_bases TGTATGAAACGCAGGGGTTGGTTTTGAAGGGTAGCCCGACAACTTTGTTGATGAGATTCAATTCAATCCCTTGGTCTATT GCGAAATTTTCTAGCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: FdxN Element Excision Controlling Factor Protein; XisI Protein-Like Protein; XisI-Like FdxN Element Excision Controlling Factor Protein; XisI Protein-Like; FdxN Element Excision Controlling Factor Protein Like; DNA Element Excision Controlling Factor XisI-Like Protein; FdxN Element Excision Controlling Factor XisI-Like Protein; Excision Controlling Factor Protein XisI Like Protein
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDKLTDYPKLIQRILSEYIELSNRRSNPDIETFLIVDESKAQYIWMNLGWQNGERVTGMTVYVRIRDGKFWIEEDWTEDG IATDLVRLGVPKEDIVLAFHEPSIRKYTDFAVVS
Sequences:
>Translated_114_residues MDKLTDYPKLIQRILSEYIELSNRRSNPDIETFLIVDESKAQYIWMNLGWQNGERVTGMTVYVRIRDGKFWIEEDWTEDG IATDLVRLGVPKEDIVLAFHEPSIRKYTDFAVVS >Mature_114_residues MDKLTDYPKLIQRILSEYIELSNRRSNPDIETFLIVDESKAQYIWMNLGWQNGERVTGMTVYVRIRDGKFWIEEDWTEDG IATDLVRLGVPKEDIVLAFHEPSIRKYTDFAVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13400; Mature: 13400
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLTDYPKLIQRILSEYIELSNRRSNPDIETFLIVDESKAQYIWMNLGWQNGERVTGMT CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEE VYVRIRDGKFWIEEDWTEDGIATDLVRLGVPKEDIVLAFHEPSIRKYTDFAVVS EEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MDKLTDYPKLIQRILSEYIELSNRRSNPDIETFLIVDESKAQYIWMNLGWQNGERVTGMT CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEE VYVRIRDGKFWIEEDWTEDGIATDLVRLGVPKEDIVLAFHEPSIRKYTDFAVVS EEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA