| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231083
Identifier: 17231083
GI number: 17231083
Start: 4338991
End: 4339950
Strand: Direct
Name: 17231083
Synonym: alr3591
Alternate gene names: NA
Gene position: 4338991-4339950 (Clockwise)
Preceding gene: 17231082
Following gene: 17231084
Centisome position: 67.65
GC content: 39.48
Gene sequence:
>960_bases GTGAAGAGATTAAATCAAATGTTACCAAAATTAAAAAATATTACCCTGGGTTTAATGGGAGCATTAGCTCTAGGTTTACA ACCTGCAAATGCAGTGAATCTTGGTGTCACACCATCCAAATTTCATGTAGATATTACTAGTAAAAAAACAAGCTCTCAGG CAATTCGCATTTTAAACTTTGATACCAAGCCAGTCGAACTGAAAGTTTATGTGCAGTCGTGGACGATGACTGAACAAAAT AAATTACAAATCATTCCTGCTGAGGAACAGTCATTAGAACAATGGATTGTTTTTACTCCCTCTCGATTTACAATTCCCCC TCGTGGTTCTCAAACTGTTCGCTTTGCGGTTCGTCCTAGAGTTAAACCTAGATCTGGTGAACATAGAGCGATTCTTTTTG TGGAAGAAGTGCCAAGACGTGATAGTACTGCCGCCAATAAAGGTGTAAATTTAATTGGTAAATTAGGGATAGCGATTTAC GGATATACCGGAGATATTAAGCGAGTTGGTGTGTTGAATGCTGTCAAAGTAGAAACTAAGCCAAAGGCGCTTAATGCCGT ATTTGATATTTCTAGCCAGGGTAACGGATATGTGAATATGCAAGGTCAATACACTATTTGGCCGGCGGCTCAATATCCTG GTGCAGAAGCTACCCAACCCATAGCTAATATAGGTAAACCAGAAACAAAAATACCTGAGCCTGTGGTACATGCAGGATTA TTACCTTCAACACCTGTATTACCTGATAGTCGTCGCCAAGTTTTATTACCCATTAAAAAGGATTTACCACCCGGTAAATA TGTGTTGGATATCAAGGGAGATTTGAATGGCGTAGCGATTAAAAAAGGCATACCATTTACAGTGCCAGAAAATAATCCAG TTGCTACTAATCGTCCTCGGATTCAACCTACATCTGAGCAACTCAGAAATTCACTGAGAAATTCTCAACAACGCAGATAG
Upstream 100 bases:
>100_bases TTGCTGGCAATTACGCTGGGGAATTAACAGTATTAGTAGAGCGTCGTTAATTTCTAGCAATTAAATTTCCCAAAAAAGTG ATGTTATAGTCTGTTTGCAA
Downstream 100 bases:
>100_bases CTTTTGCTTACTTAAAAGCTAGTTTTGATTCTTCCCAAAATCATTTTGTAATCGGGAAGCTTTTTAGGCTACCTATACGA ATTTTTGTGCTTTAGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKRLNQMLPKLKNITLGLMGALALGLQPANAVNLGVTPSKFHVDITSKKTSSQAIRILNFDTKPVELKVYVQSWTMTEQN KLQIIPAEEQSLEQWIVFTPSRFTIPPRGSQTVRFAVRPRVKPRSGEHRAILFVEEVPRRDSTAANKGVNLIGKLGIAIY GYTGDIKRVGVLNAVKVETKPKALNAVFDISSQGNGYVNMQGQYTIWPAAQYPGAEATQPIANIGKPETKIPEPVVHAGL LPSTPVLPDSRRQVLLPIKKDLPPGKYVLDIKGDLNGVAIKKGIPFTVPENNPVATNRPRIQPTSEQLRNSLRNSQQRR
Sequences:
>Translated_319_residues MKRLNQMLPKLKNITLGLMGALALGLQPANAVNLGVTPSKFHVDITSKKTSSQAIRILNFDTKPVELKVYVQSWTMTEQN KLQIIPAEEQSLEQWIVFTPSRFTIPPRGSQTVRFAVRPRVKPRSGEHRAILFVEEVPRRDSTAANKGVNLIGKLGIAIY GYTGDIKRVGVLNAVKVETKPKALNAVFDISSQGNGYVNMQGQYTIWPAAQYPGAEATQPIANIGKPETKIPEPVVHAGL LPSTPVLPDSRRQVLLPIKKDLPPGKYVLDIKGDLNGVAIKKGIPFTVPENNPVATNRPRIQPTSEQLRNSLRNSQQRR >Mature_319_residues MKRLNQMLPKLKNITLGLMGALALGLQPANAVNLGVTPSKFHVDITSKKTSSQAIRILNFDTKPVELKVYVQSWTMTEQN KLQIIPAEEQSLEQWIVFTPSRFTIPPRGSQTVRFAVRPRVKPRSGEHRAILFVEEVPRRDSTAANKGVNLIGKLGIAIY GYTGDIKRVGVLNAVKVETKPKALNAVFDISSQGNGYVNMQGQYTIWPAAQYPGAEATQPIANIGKPETKIPEPVVHAGL LPSTPVLPDSRRQVLLPIKKDLPPGKYVLDIKGDLNGVAIKKGIPFTVPENNPVATNRPRIQPTSEQLRNSLRNSQQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35195; Mature: 35195
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLNQMLPKLKNITLGLMGALALGLQPANAVNLGVTPSKFHVDITSKKTSSQAIRILNF CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEC DTKPVELKVYVQSWTMTEQNKLQIIPAEEQSLEQWIVFTPSRFTIPPRGSQTVRFAVRPR CCCCEEEEEEEEEEEECCCCCEEEEECCHHCCCEEEEECCCEEEECCCCCCEEEEEECCC VKPRSGEHRAILFVEEVPRRDSTAANKGVNLIGKLGIAIYGYTGDIKRVGVLNAVKVETK CCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEEEEEEEEECCCCEEECEEEEEEECCC PKALNAVFDISSQGNGYVNMQGQYTIWPAAQYPGAEATQPIANIGKPETKIPEPVVHAGL CCCEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCC LPSTPVLPDSRRQVLLPIKKDLPPGKYVLDIKGDLNGVAIKKGIPFTVPENNPVATNRPR CCCCCCCCCCCCEEEEEHHCCCCCCCEEEEECCCCCCEEEECCCCEECCCCCCCCCCCCC IQPTSEQLRNSLRNSQQRR CCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLNQMLPKLKNITLGLMGALALGLQPANAVNLGVTPSKFHVDITSKKTSSQAIRILNF CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEC DTKPVELKVYVQSWTMTEQNKLQIIPAEEQSLEQWIVFTPSRFTIPPRGSQTVRFAVRPR CCCCEEEEEEEEEEEECCCCCEEEEECCHHCCCEEEEECCCEEEECCCCCCEEEEEECCC VKPRSGEHRAILFVEEVPRRDSTAANKGVNLIGKLGIAIYGYTGDIKRVGVLNAVKVETK CCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEEEEEEEEECCCCEEECEEEEEEECCC PKALNAVFDISSQGNGYVNMQGQYTIWPAAQYPGAEATQPIANIGKPETKIPEPVVHAGL CCCEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCC LPSTPVLPDSRRQVLLPIKKDLPPGKYVLDIKGDLNGVAIKKGIPFTVPENNPVATNRPR CCCCCCCCCCCCEEEEEHHCCCCCCCEEEEECCCCCCEEEECCCCEECCCCCCCCCCCCC IQPTSEQLRNSLRNSQQRR CCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA