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The map label for this gene is panD

Identifier: 17231061

GI number: 17231061

Start: 4311552

End: 4311935

Strand: Reverse

Name: panD

Synonym: all3569

Alternate gene names: 17231061

Gene position: 4311935-4311552 (Counterclockwise)

Preceding gene: 17231062

Following gene: 17231060

Centisome position: 67.23

GC content: 43.49

Gene sequence:

>384_bases
ATGCAACGTACCCTCCTTTTGGCAAAAATTCATAATTGCACCCTCACTGGGGCAAACATCAATTATGTGGGTAGTATCAG
CATCGATCAAATCTTATTAGATAAATCTGGCATCTTGCCTTATGAACAAGTGCAAGTAGTGAATAATGCCAATGGACAAC
GTTTCATTACTTATGCGATCCCGGCTCCAGCGCATTCGGGAATTATTGAACTAAATGGGGCTGCCGCCCGTCTAGGCATT
ATAGGCGATCGCGTGATTATAATGACTTACGGGCAGTTTACATCTGAGGAGTTAAAAAGTTACACTCCAACGGTAGTCAT
TGTAGATGAAAAAAACCGACCTTTAGAAGTGCGGCGCTACGATGACCTGCTCAGTCAGGTCTAA

Upstream 100 bases:

>100_bases
AGTCAGTTCTTCCCCTACCTCCCCTGCTCCCTGCTTCTTCTCCTACCCCTTACTACTAAATTAACTAAGTGCAACAACTG
CTGGAGAAATTTTAACCAAA

Downstream 100 bases:

>100_bases
ATTCAAAGAAAATGACAAATCTTGAGCTGTCAGGTTCCCAAAGCTACCTAAATGATGAGTCTACTGCTAACCTAAGTAGT
CTCGCTGGTAAATTTCTCGT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MQRTLLLAKIHNCTLTGANINYVGSISIDQILLDKSGILPYEQVQVVNNANGQRFITYAIPAPAHSGIIELNGAAARLGI
IGDRVIIMTYGQFTSEELKSYTPTVVIVDEKNRPLEVRRYDDLLSQV

Sequences:

>Translated_127_residues
MQRTLLLAKIHNCTLTGANINYVGSISIDQILLDKSGILPYEQVQVVNNANGQRFITYAIPAPAHSGIIELNGAAARLGI
IGDRVIIMTYGQFTSEELKSYTPTVVIVDEKNRPLEVRRYDDLLSQV
>Mature_127_residues
MQRTLLLAKIHNCTLTGANINYVGSISIDQILLDKSGILPYEQVQVVNNANGQRFITYAIPAPAHSGIIELNGAAARLGI
IGDRVIIMTYGQFTSEELKSYTPTVVIVDEKNRPLEVRRYDDLLSQV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=119, Percent_Identity=42.0168067226891, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_ANAVT (Q3M782)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_324049.1
- ProteinModelPortal:   Q3M782
- SMR:   Q3M782
- STRING:   Q3M782
- GeneID:   3679571
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_3547
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   Q3M782
- ProtClustDB:   PRK05449
- BioCyc:   AVAR240292:AVA_3547-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14029; Mature: 14029

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTLLLAKIHNCTLTGANINYVGSISIDQILLDKSGILPYEQVQVVNNANGQRFITYAI
CCCEEEEEEECCEEEECCCEEEEECCEEEEEEECCCCCCCHHHEEEEECCCCCEEEEEEE
PAPAHSGIIELNGAAARLGIIGDRVIIMTYGQFTSEELKSYTPTVVIVDEKNRPLEVRRY
CCCCCCCEEEECCCEEEEEEECCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEEEHH
DDLLSQV
HHHHHCC
>Mature Secondary Structure
MQRTLLLAKIHNCTLTGANINYVGSISIDQILLDKSGILPYEQVQVVNNANGQRFITYAI
CCCEEEEEEECCEEEECCCEEEEECCEEEEEEECCCCCCCHHHEEEEECCCCCEEEEEEE
PAPAHSGIIELNGAAARLGIIGDRVIIMTYGQFTSEELKSYTPTVVIVDEKNRPLEVRRY
CCCCCCCEEEECCCEEEEEEECCEEEEEEECCCCHHHHHCCCCEEEEEECCCCCEEEEHH
DDLLSQV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA