Click here to switch to the map view.

The map label for this gene is c

Identifier: 17231041

GI number: 17231041

Start: 4278054

End: 4278533

Strand: Reverse

Name: c

Synonym: all3549

Alternate gene names: NA

Gene position: 4278533-4278054 (Counterclockwise)

Preceding gene: 17231042

Following gene: 17231037

Centisome position: 66.71

GC content: 43.33

Gene sequence:

>480_bases
GTGATGCCCATAGAAACAACTTCACGTCTTGCTAAACTCAACATTGTGGATGAGTTAGTTCAAGATTTACGTAGTACTGA
CCCCACAAAACGACACAAAGCTATCTGGGATTTAGGACAACAGGGCGATTCGCGTGCAATTCAACCACTCGTCAATATGT
TGATTGATGCCGATTCACAACAACGGAACTTAATTTTGGCTGCTTTATCAGAAATTAACGTCCGTTCACTCAAACCAATC
AACAAGGCTTTTGCCGTCTCCATGCAGGACGAAAGCCCACAAGTTAGACAAAACGCAATTCGTGATTTAACTCGCGTCTA
TGACATGATGGCTCAGATGAGCCAGATGTTAGCTCATGCCCTAGATGACCCTGATGCTGAAGTCCAGGCAACAGCAAGGT
ATGCCCTAACTCAGATGAATAGAATGCGGAATGTAGATAAAAAAAGCCTAGCAGACAGTACTCTAGAAGATTCTCGTTAA

Upstream 100 bases:

>100_bases
TGCACCAGTTTTACAAGAGTTAGCACACACATCTAATTATCAGGAAACTACTGCTCAAGCCAGCGTTTCCCAAACAGCGC
CAGCATCATTCCCCGCGACG

Downstream 100 bases:

>100_bases
AATCCTCATTTACAACTTTTTCATCTGGACTTGAATAGTAGTGTTGCGGCCTGCCAAAATAAAAGCGGCATCTCCAAATT
TGGGGGCGCTGGTGCGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MMPIETTSRLAKLNIVDELVQDLRSTDPTKRHKAIWDLGQQGDSRAIQPLVNMLIDADSQQRNLILAALSEINVRSLKPI
NKAFAVSMQDESPQVRQNAIRDLTRVYDMMAQMSQMLAHALDDPDAEVQATARYALTQMNRMRNVDKKSLADSTLEDSR

Sequences:

>Translated_159_residues
MMPIETTSRLAKLNIVDELVQDLRSTDPTKRHKAIWDLGQQGDSRAIQPLVNMLIDADSQQRNLILAALSEINVRSLKPI
NKAFAVSMQDESPQVRQNAIRDLTRVYDMMAQMSQMLAHALDDPDAEVQATARYALTQMNRMRNVDKKSLADSTLEDSR
>Mature_159_residues
MMPIETTSRLAKLNIVDELVQDLRSTDPTKRHKAIWDLGQQGDSRAIQPLVNMLIDADSQQRNLILAALSEINVRSLKPI
NKAFAVSMQDESPQVRQNAIRDLTRVYDMMAQMSQMLAHALDDPDAEVQATARYALTQMNRMRNVDKKSLADSTLEDSR

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17980; Mature: 17980

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPIETTSRLAKLNIVDELVQDLRSTDPTKRHKAIWDLGQQGDSRAIQPLVNMLIDADSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
QRNLILAALSEINVRSLKPINKAFAVSMQDESPQVRQNAIRDLTRVYDMMAQMSQMLAHA
HHHHHHHHHHHCCHHHHCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDPDAEVQATARYALTQMNRMRNVDKKSLADSTLEDSR
HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPIETTSRLAKLNIVDELVQDLRSTDPTKRHKAIWDLGQQGDSRAIQPLVNMLIDADSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
QRNLILAALSEINVRSLKPINKAFAVSMQDESPQVRQNAIRDLTRVYDMMAQMSQMLAHA
HHHHHHHHHHHCCHHHHCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDPDAEVQATARYALTQMNRMRNVDKKSLADSTLEDSR
HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA