| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231037
Identifier: 17231037
GI number: 17231037
Start: 4270829
End: 4271146
Strand: Reverse
Name: 17231037
Synonym: all3545
Alternate gene names: NA
Gene position: 4271146-4270829 (Counterclockwise)
Preceding gene: 17231041
Following gene: 17231034
Centisome position: 66.59
GC content: 42.14
Gene sequence:
>318_bases ATGAGTTTAGCTGTCATTAAGTTTTCCTCCGAAGAGTGCGGCATCTGCCACAAAATGGCTTTCTATGACCAAAAAGTGGC TGAAGAACTGGGCTTACAATTTATTGATGTCAAAATGCAGGATACGGCGACTTATCGCAAGTATCGCAAGATTTTGCTGA CTCAGTATCCCGATAAATCCGAAATGGGATGGCCTACTTATATTATCTGCGAGTCTCCCGAAGGAGAATTCAACATCAAA GGTGAAGTTAAAGGAGGTCATCCCAAAGGTGAATTTAGAACTCGTCTACAGCAGGTTCTTGATTCCAGTAGTAGTTAG
Upstream 100 bases:
>100_bases CTCTAGAAATTTTACTTTTACACCTATAACAGTTTAATGTCTGTAGCCTAAGCGCTATGCTGAAGAATATTGGCTACATC AACAAGAGACACAGAGCTAC
Downstream 100 bases:
>100_bases GGGTTTAGGGGTGTAGGGGAAATGAGAGGAATGAGGGAGATAGTTCACTCAACACTCATTACTCATCACTTAGAACTTCA AAAGATTTCACCTCTAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSLAVIKFSSEECGICHKMAFYDQKVAEELGLQFIDVKMQDTATYRKYRKILLTQYPDKSEMGWPTYIICESPEGEFNIK GEVKGGHPKGEFRTRLQQVLDSSSS
Sequences:
>Translated_105_residues MSLAVIKFSSEECGICHKMAFYDQKVAEELGLQFIDVKMQDTATYRKYRKILLTQYPDKSEMGWPTYIICESPEGEFNIK GEVKGGHPKGEFRTRLQQVLDSSSS >Mature_104_residues SLAVIKFSSEECGICHKMAFYDQKVAEELGLQFIDVKMQDTATYRKYRKILLTQYPDKSEMGWPTYIICESPEGEFNIKG EVKGGHPKGEFRTRLQQVLDSSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12019; Mature: 11888
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVIKFSSEECGICHKMAFYDQKVAEELGLQFIDVKMQDTATYRKYRKILLTQYPDKS CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCC EMGWPTYIICESPEGEFNIKGEVKGGHPKGEFRTRLQQVLDSSSS CCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SLAVIKFSSEECGICHKMAFYDQKVAEELGLQFIDVKMQDTATYRKYRKILLTQYPDKS CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCC EMGWPTYIICESPEGEFNIKGEVKGGHPKGEFRTRLQQVLDSSSS CCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA