| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is ybaL [H]
Identifier: 17231026
GI number: 17231026
Start: 4257149
End: 4258870
Strand: Reverse
Name: ybaL [H]
Synonym: all3534
Alternate gene names: 17231026
Gene position: 4258870-4257149 (Counterclockwise)
Preceding gene: 17231028
Following gene: 17231024
Centisome position: 66.4
GC content: 42.1
Gene sequence:
>1722_bases ATGGCAGCAGAGCATGGCTTGATTCTGGACTTTACAACTGTTCTCGGTGCTTCAGCTTTAGGCGGATACTTAGCTAACCG ATTGCGGCAACCTGTTTTGCTGGGTTATTTAGTGACTGGATTGGCTCTAGGGCCTTATGGGTTGAAGTTGTTAAGTGATG TACCACGTATTCAATCTCTAGCGTCAATTGGTGTAGCTTTTTTGTTGTTTGCTCTAGGTGTGGAATTTTCCTTAACAGAG TTGAGGCGGGTCAAGAATATTGCTATTAACGGTAGCCTGTTGCAAATTGGTCTAACTACAGCTTTGGTGGCATTTTTAAC AATTACGTTGGGCTGGGTTGATAACTTGACGCAAGGCATTTTTTTAGGGGTGGTTCTTTCTCTTTCTTCCACAGCAGTAG TCTTGAAAACTTTGGGAGAACGAGGTGAAACAAATACGCTCCACGGTCAAGTCATGCTAGCAATTTTAATTGCTCAGGAT TTAGCACTGGGATTAATATTAGCTTTTTTACCTGTCCTCAACCAACCAGAAAGACTTGTCTGGGCATTAGGCATAGCTTT GCTGAAAGTTTTGCTATTTTTAGCATTGGCGATCGCCTTGGGTCGTTGGATAGTGCCGAAGTTAATCAGTAATGTAGCAG CTACAGAAAGTACAGAGTTATTTGTTTTAACCGTAATTTCTTTATGTTTGAGTGTGGCCTTGGTGACAGCAAAACTTGGA CTTTCTATCGAAATGGGTGCATTTGTGGCCGGGTTAATGGTTTCGGAAATCGACCATGCGGATCATGCTCTTGCCAAAGT TTTACCGTTAAGAGATACCTTTGCTTGTCTATTCTTTGCTTCTATTGGGATGCTGATCGATCCAATTGCACTCATGCAAA ATTTGGGTCTAGTTTTGGGACTGGTCACTTTAGTCATGTTGGGTAAGGCAATTGTTGTAATGCCAATCATTTTAAAATTT GGCTACTCCCTCAAAACTACTATCCTTACCAGTTTGGGAATTAATCAGATTGGAGAGTTTTCCTTTGTTCTGGCTTTGGC AGGTTTACAACTCCAACTGATTCCTGAAAAAACCTATATTTTACTCTTAGAGACAACCGCAATCACACTAGTTCTCACTC CCATATCGCTGAATATTGCACCCCAGTTGATAGAACGTCTCACCCAGATTCCGTTTTTTGCCCAATCACTGCGACAATTT ACAGAACCCAACATCCTCTCTATTCCAGAAACCATTAGTGGTCATGTTGTGGTTGCAGGTTACGGAAGAGTCGGGCAAGT GATTGTCAATATTTTGCTCAATCAGGGATATGTAGTCTTAGTAATTGAAAACAGTGAAGCTGCCATTCAAAGATTGAGAA TGCAGCGCATCCCCTACATTTTTGGAGATGCTGATTCCGAGCTAGTGTTAGAAAAAATCCATTTAGAAACTGCCAAAGCC CTAGCAATTGCCTTACCTGATCCTGCCAGTTCACGATTACTTCTAAAACGAGCATTAGCGATCGCCCCTAAATTAGATGT AATTGCGCGATCGCACCATGACAATGAAATTGATCTGCTCACACAAATGGGTGCAAAGGAAGTCGTTCAACCAGAATTTG AAGCCGCCCTAGAATTAAGCGCACATCTCCTATCCACTTTAGGAGAAGCAAAAAGTCAGATTGACACAGTTATCTCTGAT ATTCGCACCGACAGATATCGTAGTATCCGACCGAGGAGATGA
Upstream 100 bases:
>100_bases AATCTAAGCAACTTTAGTTGCAGTCAAAAATTGATACATAACGAAAGAACCAACGCAAAGATATTTTCAGAACTGAATAG TTGATCAACAACAAAGAAAT
Downstream 100 bases:
>100_bases TATGGCTGTTGACTGTTGACAGACTTGAAAGCCTTGTTTTGTCAGGGTTTTATCTTACATTAATTACTTATCAGTAACAA AATTTAACCCTAAAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MAAEHGLILDFTTVLGASALGGYLANRLRQPVLLGYLVTGLALGPYGLKLLSDVPRIQSLASIGVAFLLFALGVEFSLTE LRRVKNIAINGSLLQIGLTTALVAFLTITLGWVDNLTQGIFLGVVLSLSSTAVVLKTLGERGETNTLHGQVMLAILIAQD LALGLILAFLPVLNQPERLVWALGIALLKVLLFLALAIALGRWIVPKLISNVAATESTELFVLTVISLCLSVALVTAKLG LSIEMGAFVAGLMVSEIDHADHALAKVLPLRDTFACLFFASIGMLIDPIALMQNLGLVLGLVTLVMLGKAIVVMPIILKF GYSLKTTILTSLGINQIGEFSFVLALAGLQLQLIPEKTYILLLETTAITLVLTPISLNIAPQLIERLTQIPFFAQSLRQF TEPNILSIPETISGHVVVAGYGRVGQVIVNILLNQGYVVLVIENSEAAIQRLRMQRIPYIFGDADSELVLEKIHLETAKA LAIALPDPASSRLLLKRALAIAPKLDVIARSHHDNEIDLLTQMGAKEVVQPEFEAALELSAHLLSTLGEAKSQIDTVISD IRTDRYRSIRPRR
Sequences:
>Translated_573_residues MAAEHGLILDFTTVLGASALGGYLANRLRQPVLLGYLVTGLALGPYGLKLLSDVPRIQSLASIGVAFLLFALGVEFSLTE LRRVKNIAINGSLLQIGLTTALVAFLTITLGWVDNLTQGIFLGVVLSLSSTAVVLKTLGERGETNTLHGQVMLAILIAQD LALGLILAFLPVLNQPERLVWALGIALLKVLLFLALAIALGRWIVPKLISNVAATESTELFVLTVISLCLSVALVTAKLG LSIEMGAFVAGLMVSEIDHADHALAKVLPLRDTFACLFFASIGMLIDPIALMQNLGLVLGLVTLVMLGKAIVVMPIILKF GYSLKTTILTSLGINQIGEFSFVLALAGLQLQLIPEKTYILLLETTAITLVLTPISLNIAPQLIERLTQIPFFAQSLRQF TEPNILSIPETISGHVVVAGYGRVGQVIVNILLNQGYVVLVIENSEAAIQRLRMQRIPYIFGDADSELVLEKIHLETAKA LAIALPDPASSRLLLKRALAIAPKLDVIARSHHDNEIDLLTQMGAKEVVQPEFEAALELSAHLLSTLGEAKSQIDTVISD IRTDRYRSIRPRR >Mature_572_residues AAEHGLILDFTTVLGASALGGYLANRLRQPVLLGYLVTGLALGPYGLKLLSDVPRIQSLASIGVAFLLFALGVEFSLTEL RRVKNIAINGSLLQIGLTTALVAFLTITLGWVDNLTQGIFLGVVLSLSSTAVVLKTLGERGETNTLHGQVMLAILIAQDL ALGLILAFLPVLNQPERLVWALGIALLKVLLFLALAIALGRWIVPKLISNVAATESTELFVLTVISLCLSVALVTAKLGL SIEMGAFVAGLMVSEIDHADHALAKVLPLRDTFACLFFASIGMLIDPIALMQNLGLVLGLVTLVMLGKAIVVMPIILKFG YSLKTTILTSLGINQIGEFSFVLALAGLQLQLIPEKTYILLLETTAITLVLTPISLNIAPQLIERLTQIPFFAQSLRQFT EPNILSIPETISGHVVVAGYGRVGQVIVNILLNQGYVVLVIENSEAAIQRLRMQRIPYIFGDADSELVLEKIHLETAKAL AIALPDPASSRLLLKRALAIAPKLDVIARSHHDNEIDLLTQMGAKEVVQPEFEAALELSAHLLSTLGEAKSQIDTVISDI RTDRYRSIRPRR
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=401, Percent_Identity=29.426433915212, Blast_Score=132, Evalue=6e-31, Organism=Escherichia coli, GI1786685, Length=537, Percent_Identity=35.0093109869646, Blast_Score=285, Evalue=7e-78, Organism=Escherichia coli, GI1789749, Length=555, Percent_Identity=27.027027027027, Blast_Score=175, Evalue=6e-45, Organism=Escherichia coli, GI1786232, Length=553, Percent_Identity=28.75226039783, Blast_Score=171, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 61751; Mature: 61619
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEHGLILDFTTVLGASALGGYLANRLRQPVLLGYLVTGLALGPYGLKLLSDVPRIQSL CCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASIGVAFLLFALGVEFSLTELRRVKNIAINGSLLQIGLTTALVAFLTITLGWVDNLTQGI HHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGVVLSLSSTAVVLKTLGERGETNTLHGQVMLAILIAQDLALGLILAFLPVLNQPERLV HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH WALGIALLKVLLFLALAIALGRWIVPKLISNVAATESTELFVLTVISLCLSVALVTAKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC LSIEMGAFVAGLMVSEIDHADHALAKVLPLRDTFACLFFASIGMLIDPIALMQNLGLVLG CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTLVMLGKAIVVMPIILKFGYSLKTTILTSLGINQIGEFSFVLALAGLQLQLIPEKTYI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCEEE LLLETTAITLVLTPISLNIAPQLIERLTQIPFFAQSLRQFTEPNILSIPETISGHVVVAG EEEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCCCEEEEE YGRVGQVIVNILLNQGYVVLVIENSEAAIQRLRMQRIPYIFGDADSELVLEKIHLETAKA CCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHE LAIALPDPASSRLLLKRALAIAPKLDVIARSHHDNEIDLLTQMGAKEVVQPEFEAALELS EEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCHHHHCCHHHHHHHHHH AHLLSTLGEAKSQIDTVISDIRTDRYRSIRPRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAEHGLILDFTTVLGASALGGYLANRLRQPVLLGYLVTGLALGPYGLKLLSDVPRIQSL CCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASIGVAFLLFALGVEFSLTELRRVKNIAINGSLLQIGLTTALVAFLTITLGWVDNLTQGI HHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGVVLSLSSTAVVLKTLGERGETNTLHGQVMLAILIAQDLALGLILAFLPVLNQPERLV HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH WALGIALLKVLLFLALAIALGRWIVPKLISNVAATESTELFVLTVISLCLSVALVTAKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC LSIEMGAFVAGLMVSEIDHADHALAKVLPLRDTFACLFFASIGMLIDPIALMQNLGLVLG CCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTLVMLGKAIVVMPIILKFGYSLKTTILTSLGINQIGEFSFVLALAGLQLQLIPEKTYI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCCEEE LLLETTAITLVLTPISLNIAPQLIERLTQIPFFAQSLRQFTEPNILSIPETISGHVVVAG EEEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCCCEEEEE YGRVGQVIVNILLNQGYVVLVIENSEAAIQRLRMQRIPYIFGDADSELVLEKIHLETAKA CCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHE LAIALPDPASSRLLLKRALAIAPKLDVIARSHHDNEIDLLTQMGAKEVVQPEFEAALELS EEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCHHHHCCHHHHHHHHHH AHLLSTLGEAKSQIDTVISDIRTDRYRSIRPRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]