| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is ycjG [H]
Identifier: 17231024
GI number: 17231024
Start: 4255207
End: 4256259
Strand: Reverse
Name: ycjG [H]
Synonym: all3532
Alternate gene names: 17231024
Gene position: 4256259-4255207 (Counterclockwise)
Preceding gene: 17231026
Following gene: 17231023
Centisome position: 66.36
GC content: 43.87
Gene sequence:
>1053_bases ATGCAGGTAGAAGTCATTTTGTTCACGGTCAATAAAAGATTTCCCTTGACTATTAGTCGTGGCACTACAGCAAAGACTAC AAATGTCTGGGTGAAAATTCTACATGATGACATCGAAGGCTGGGGTGAGGCTTCACCGTTTGGTGTGGGTAATTATGGAC AATCAACTAATGTCATCAATGACTACTTGCAGCAAATTGTGCCATTCTTAGAACCATTTAGCCCGTTGCAGCGACAGGAA ATAGAGGAAGTATTTATTAAATATCAGGTTCCTTCCGCAGTGAGGGCGGCGCTGGATATGGCGATGCACGACTGGCTGGG TAAGTTTGTGGGTTTACCTTTATGGCAAATCTGGGGACTAGATCGCCAGGCTATAGTACCAACTTCTGTTACCATTGGTA TTGATACACCAGAAGCCGCCAGAATACGGACAAGAGACTGGTTAGAATTTACGGATGTTCGCCTGTTGAAAGTGAAGTTA GGCAGTCCTGATGGTATTGAAGCAGACAAGAAGATGCTCTTAGCTGTGCAGCAAGAAGCACCAGCACAAGAATTTTTTGT GGATGCCAACGGGGGTTGGTATTTGGACGATGCGGTAGAAATGTGCAGTTGGCTGGCTGATTTAGGTATTAAGTATATTG AACAGCCGCTAGTTAGGGGGCGAGAACAAGATTTAATCAAACTGAAAGAAAAATCCCCCCTACCGATATTTGTGGATGAA AGTTGCTTTAACAGTAAAGATATTCCCCGTTTGGCTACTTATGTGGATGGCATCAATATCAAATTGATGAAATCTGGGGG TTTAACTGAGGCGCTGCGGATGGTACACACAGCTAAAGCTTGTGGGTTACAAGTGATGTTCGGCTGTTATTCTGACAGTA CATTATCCAATACGGCTGCGGCGCAATTAGCGCCATTAGCTGATTATTTAGACTTAGACAGTCACCTTAACTTAAGTGAT GACCCTTTCACTGGTGCATTATTAAAAGAAGGGCGAGTGATACCAAACGATTTACCAGGCTTGGGGGTAAGATATAGTGC GTCTGCCACTTAA
Upstream 100 bases:
>100_bases TGTGTTCCCTAATGAATGTAAAAAAGTATAACAGATACCTCAAATAAGCTAAACTTTGTATTTACACTGTTTTTGCTCTC AGCAAAGATTGAGCGTTGTT
Downstream 100 bases:
>100_bases TCAACGAGTAGCAATTCTGCTACATGAAGGAACTACTGGAACTGTGGGCAAAACCGGGCTAGCACTTTTACGCTACAGTG AAGCCTCTATTGTCGCCGTA
Product: muconate cycloisomerase
Products: NA
Alternate protein names: AE epimerase; AEE [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MQVEVILFTVNKRFPLTISRGTTAKTTNVWVKILHDDIEGWGEASPFGVGNYGQSTNVINDYLQQIVPFLEPFSPLQRQE IEEVFIKYQVPSAVRAALDMAMHDWLGKFVGLPLWQIWGLDRQAIVPTSVTIGIDTPEAARIRTRDWLEFTDVRLLKVKL GSPDGIEADKKMLLAVQQEAPAQEFFVDANGGWYLDDAVEMCSWLADLGIKYIEQPLVRGREQDLIKLKEKSPLPIFVDE SCFNSKDIPRLATYVDGINIKLMKSGGLTEALRMVHTAKACGLQVMFGCYSDSTLSNTAAAQLAPLADYLDLDSHLNLSD DPFTGALLKEGRVIPNDLPGLGVRYSASAT
Sequences:
>Translated_350_residues MQVEVILFTVNKRFPLTISRGTTAKTTNVWVKILHDDIEGWGEASPFGVGNYGQSTNVINDYLQQIVPFLEPFSPLQRQE IEEVFIKYQVPSAVRAALDMAMHDWLGKFVGLPLWQIWGLDRQAIVPTSVTIGIDTPEAARIRTRDWLEFTDVRLLKVKL GSPDGIEADKKMLLAVQQEAPAQEFFVDANGGWYLDDAVEMCSWLADLGIKYIEQPLVRGREQDLIKLKEKSPLPIFVDE SCFNSKDIPRLATYVDGINIKLMKSGGLTEALRMVHTAKACGLQVMFGCYSDSTLSNTAAAQLAPLADYLDLDSHLNLSD DPFTGALLKEGRVIPNDLPGLGVRYSASAT >Mature_350_residues MQVEVILFTVNKRFPLTISRGTTAKTTNVWVKILHDDIEGWGEASPFGVGNYGQSTNVINDYLQQIVPFLEPFSPLQRQE IEEVFIKYQVPSAVRAALDMAMHDWLGKFVGLPLWQIWGLDRQAIVPTSVTIGIDTPEAARIRTRDWLEFTDVRLLKVKL GSPDGIEADKKMLLAVQQEAPAQEFFVDANGGWYLDDAVEMCSWLADLGIKYIEQPLVRGREQDLIKLKEKSPLPIFVDE SCFNSKDIPRLATYVDGINIKLMKSGGLTEALRMVHTAKACGLQVMFGCYSDSTLSNTAAAQLAPLADYLDLDSHLNLSD DPFTGALLKEGRVIPNDLPGLGVRYSASAT
Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has a role in the recycling of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the reverse reaction and the epimerization of all the L-Ala-X dipeptides, excep
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=300, Percent_Identity=33, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: NA
Molecular weight: Translated: 38879; Mature: 38879
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVEVILFTVNKRFPLTISRGTTAKTTNVWVKILHDDIEGWGEASPFGVGNYGQSTNVIN CEEEEEEEEECCCCCEEEECCCCCCHHHHEEEEEEHHHCCCCCCCCCCCCCCCCCCHHHH DYLQQIVPFLEPFSPLQRQEIEEVFIKYQVPSAVRAALDMAMHDWLGKFVGLPLWQIWGL HHHHHHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC DRQAIVPTSVTIGIDTPEAARIRTRDWLEFTDVRLLKVKLGSPDGIEADKKMLLAVQQEA CCCEECCCEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCHHHHHEEEECCCC PAQEFFVDANGGWYLDDAVEMCSWLADLGIKYIEQPLVRGREQDLIKLKEKSPLPIFVDE CCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECC SCFNSKDIPRLATYVDGINIKLMKSGGLTEALRMVHTAKACGLQVMFGCYSDSTLSNTAA CCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH AQLAPLADYLDLDSHLNLSDDPFTGALLKEGRVIPNDLPGLGVRYSASAT HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEECCCCCCCCCEEECCCCC >Mature Secondary Structure MQVEVILFTVNKRFPLTISRGTTAKTTNVWVKILHDDIEGWGEASPFGVGNYGQSTNVIN CEEEEEEEEECCCCCEEEECCCCCCHHHHEEEEEEHHHCCCCCCCCCCCCCCCCCCHHHH DYLQQIVPFLEPFSPLQRQEIEEVFIKYQVPSAVRAALDMAMHDWLGKFVGLPLWQIWGL HHHHHHHHHHCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC DRQAIVPTSVTIGIDTPEAARIRTRDWLEFTDVRLLKVKLGSPDGIEADKKMLLAVQQEA CCCEECCCEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCHHHHHEEEECCCC PAQEFFVDANGGWYLDDAVEMCSWLADLGIKYIEQPLVRGREQDLIKLKEKSPLPIFVDE CCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECC SCFNSKDIPRLATYVDGINIKLMKSGGLTEALRMVHTAKACGLQVMFGCYSDSTLSNTAA CCCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHH AQLAPLADYLDLDSHLNLSDDPFTGALLKEGRVIPNDLPGLGVRYSASAT HHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEECCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7499381; 9097039; 9278503 [H]