Click here to switch to the map view.

The map label for this gene is 17230868

Identifier: 17230868

GI number: 17230868

Start: 4087237

End: 4088916

Strand: Direct

Name: 17230868

Synonym: alr3376

Alternate gene names: NA

Gene position: 4087237-4088916 (Clockwise)

Preceding gene: 17230864

Following gene: 17230869

Centisome position: 63.73

GC content: 42.98

Gene sequence:

>1680_bases
ATGCTTAATATGAGTTTTGCACCCACCAGTTTGACAGTTAGCCAAATGTCAGGGACAAGGACAATTAGACCATTGACAGC
TGCTACTTTATGTGGCATTGCTTTTATCCAGGATAGACTGATCGCCATTGACAGTATCAAGGGGCATTTACTAGAAATTG
ACCCGAAAACTGATAACAGCAAGATTCTCAACCCTCACCAAGCCAAAGAGTTTACAGATGTAACCGGTTTAGCTGTTTGG
GAGGATAACCTTTGGGTAACTCGCGGTAACAGTGTGTATGTATCTAAGCTCTCATCTTTAGGCTTGGAACATTTTGTCAC
GTTACCTTATAGCGCCGACGGTGTTGCTGTTTGGGAATCAACAGTTTACGTTAGTTGCCATAGGTTAGGTTACATTCTGA
TTTTTGACCGCGATACTCGTAAAGAGATTACCAGATTTTATGCCCCTGGAGTTGGGGTAGAGAATTTGGTTGTCAATGGT
AATACATTGTGGGTGTGCGATCGCACCGAACAAACAGTCTACTCTATGGATAGGGCAACTGGGGAGGTAATATTTAGTGT
TTTAACTCCCTTTGAATCACCTACAGGCATAGCGGTACATTTAGATGCCGAAACAGGTAAAGAAAATCTTTATGTTGCCT
ACGCCTCAGAAGAACCCTATATCCGGGATAATCCCAATGCTGATCCTAATCATGAATTAACGTACCGCGATCGCACTTTT
ATTCACCCCCTCTACTATCATCACCAGCCAGATAAACACTACGCCCTTTCTAACGGTTATTTAATCGAAATGTCCTACGC
TGAGGAAATTTCGCCTTTAGAAGAGGTGTACATCCCAGAGGTAGAATGGCGGATTGCTCTCCCCTCAGAAACTGAACGCC
AAAAAATTCGACACATTGAACCCATCGGTATACCTTTCACAGAAGAAGTCATTGACGGACAACGTGTTGCATTATTTAAA
TTTGATGCCCTAGTTCCTGGTGAACGCCATATCTTTGGCTGGAAAGCATTATTAGAAGTCCGAGGCATTAAGTATCGCAT
CACACCCAAAGAAGTAGAGAATATTCCTGAACTATCACCGGAATTTCAAGAGCGCTACTTGGTGGATGATGACGATTTAG
CAATGGACACTAGTATAGTCCGCCGCGCTGCTGAAGAAGCTGTTGGCTCAGAAACAAATTTGTTGCGGAAAATGTACAGC
ATCCGTAATTATGTTTACGATGAGCTATCTTATGGTATTAAGCCATACATAGATACACCTGATATCGTTTTAGAGCGAGG
CATTGGTTCCTGTGGCGAATATGTGGGTGTGTTACTTGCTCTTTGCCGTTTGAATGGTATTCCTTGCCGTACCGTGGGCA
GATACAAATGCCCCCCACAAGCCGAACAGCAAGGAGTTCCCCTGCAACCAGATTTTAATCATGTGTGGTTAGAATTTTAC
ATTCCTGGCTTTGGCTGGTTGCCGATGGAATCTAACCCTGATGATTTGGGTCGTGGTAGCCAGTACCCTACTCGCTTTTT
TATGGGCTTATGCTGGTATCACATTGAAATCGGTAAAGGTGTTTCCTTTGAAACTATCAGTAGTCAAGGTAAGAGATTAA
CCAAGGATGATATCCCCATAGGTGATTTGGCGATTAATCACATTCGGTTTACAATTGTCAAGGAATTACCAGATTTTTGA

Upstream 100 bases:

>100_bases
GAAGACATTTTACTGATAATTGAGAATAACACCCAGTCTGATTTTGGATTACAAATGCCATGCCACAATTAATTTTAGGC
GTGCTAACCGTTAAATAAAT

Downstream 100 bases:

>100_bases
AGCTGCTCCTACAAGAATGAAAAATGGACAGAGGGAATGATGATATCTGCCCTCTGCCCTAAAATTTGGTAAGTAAATTG
GGCATACACTATTAGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like; Membrane-Bound Protease

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLNMSFAPTSLTVSQMSGTRTIRPLTAATLCGIAFIQDRLIAIDSIKGHLLEIDPKTDNSKILNPHQAKEFTDVTGLAVW
EDNLWVTRGNSVYVSKLSSLGLEHFVTLPYSADGVAVWESTVYVSCHRLGYILIFDRDTRKEITRFYAPGVGVENLVVNG
NTLWVCDRTEQTVYSMDRATGEVIFSVLTPFESPTGIAVHLDAETGKENLYVAYASEEPYIRDNPNADPNHELTYRDRTF
IHPLYYHHQPDKHYALSNGYLIEMSYAEEISPLEEVYIPEVEWRIALPSETERQKIRHIEPIGIPFTEEVIDGQRVALFK
FDALVPGERHIFGWKALLEVRGIKYRITPKEVENIPELSPEFQERYLVDDDDLAMDTSIVRRAAEEAVGSETNLLRKMYS
IRNYVYDELSYGIKPYIDTPDIVLERGIGSCGEYVGVLLALCRLNGIPCRTVGRYKCPPQAEQQGVPLQPDFNHVWLEFY
IPGFGWLPMESNPDDLGRGSQYPTRFFMGLCWYHIEIGKGVSFETISSQGKRLTKDDIPIGDLAINHIRFTIVKELPDF

Sequences:

>Translated_559_residues
MLNMSFAPTSLTVSQMSGTRTIRPLTAATLCGIAFIQDRLIAIDSIKGHLLEIDPKTDNSKILNPHQAKEFTDVTGLAVW
EDNLWVTRGNSVYVSKLSSLGLEHFVTLPYSADGVAVWESTVYVSCHRLGYILIFDRDTRKEITRFYAPGVGVENLVVNG
NTLWVCDRTEQTVYSMDRATGEVIFSVLTPFESPTGIAVHLDAETGKENLYVAYASEEPYIRDNPNADPNHELTYRDRTF
IHPLYYHHQPDKHYALSNGYLIEMSYAEEISPLEEVYIPEVEWRIALPSETERQKIRHIEPIGIPFTEEVIDGQRVALFK
FDALVPGERHIFGWKALLEVRGIKYRITPKEVENIPELSPEFQERYLVDDDDLAMDTSIVRRAAEEAVGSETNLLRKMYS
IRNYVYDELSYGIKPYIDTPDIVLERGIGSCGEYVGVLLALCRLNGIPCRTVGRYKCPPQAEQQGVPLQPDFNHVWLEFY
IPGFGWLPMESNPDDLGRGSQYPTRFFMGLCWYHIEIGKGVSFETISSQGKRLTKDDIPIGDLAINHIRFTIVKELPDF
>Mature_559_residues
MLNMSFAPTSLTVSQMSGTRTIRPLTAATLCGIAFIQDRLIAIDSIKGHLLEIDPKTDNSKILNPHQAKEFTDVTGLAVW
EDNLWVTRGNSVYVSKLSSLGLEHFVTLPYSADGVAVWESTVYVSCHRLGYILIFDRDTRKEITRFYAPGVGVENLVVNG
NTLWVCDRTEQTVYSMDRATGEVIFSVLTPFESPTGIAVHLDAETGKENLYVAYASEEPYIRDNPNADPNHELTYRDRTF
IHPLYYHHQPDKHYALSNGYLIEMSYAEEISPLEEVYIPEVEWRIALPSETERQKIRHIEPIGIPFTEEVIDGQRVALFK
FDALVPGERHIFGWKALLEVRGIKYRITPKEVENIPELSPEFQERYLVDDDDLAMDTSIVRRAAEEAVGSETNLLRKMYS
IRNYVYDELSYGIKPYIDTPDIVLERGIGSCGEYVGVLLALCRLNGIPCRTVGRYKCPPQAEQQGVPLQPDFNHVWLEFY
IPGFGWLPMESNPDDLGRGSQYPTRFFMGLCWYHIEIGKGVSFETISSQGKRLTKDDIPIGDLAINHIRFTIVKELPDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63550; Mature: 63550

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNMSFAPTSLTVSQMSGTRTIRPLTAATLCGIAFIQDRLIAIDSIKGHLLEIDPKTDNS
CCCCCCCCCEEEEECCCCCCEECHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCC
KILNPHQAKEFTDVTGLAVWEDNLWVTRGNSVYVSKLSSLGLEHFVTLPYSADGVAVWES
CCCCCHHHHHHCCCCEEEEEECCEEEEECCEEEEHHHHHCCCEEEEECCCCCCCEEEEEE
TVYVSCHRLGYILIFDRDTRKEITRFYAPGVGVENLVVNGNTLWVCDRTEQTVYSMDRAT
EEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHH
GEVIFSVLTPFESPTGIAVHLDAETGKENLYVAYASEEPYIRDNPNADPNHELTYRDRTF
HHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCEE
IHPLYYHHQPDKHYALSNGYLIEMSYAEEISPLEEVYIPEVEWRIALPSETERQKIRHIE
EEEEEECCCCCCCEEECCCEEEEEECHHHCCCHHHHCCCCEEEEEECCCCHHHHHHHCCC
PIGIPFTEEVIDGQRVALFKFDALVPGERHIFGWKALLEVRGIKYRITPKEVENIPELSP
CCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEHHHHHHHHCCCEEEECHHHHHCCCCCCH
EFQERYLVDDDDLAMDTSIVRRAAEEAVGSETNLLRKMYSIRNYVYDELSYGIKPYIDTP
HHHHCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DIVLERGIGSCGEYVGVLLALCRLNGIPCRTVGRYKCPPQAEQQGVPLQPDFNHVWLEFY
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEE
IPGFGWLPMESNPDDLGRGSQYPTRFFMGLCWYHIEIGKGVSFETISSQGKRLTKDDIPI
ECCEEECCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCCCCCCHHHHHCCCCCCCCCCCC
GDLAINHIRFTIVKELPDF
CCEEHHHEEEEEECCCCCC
>Mature Secondary Structure
MLNMSFAPTSLTVSQMSGTRTIRPLTAATLCGIAFIQDRLIAIDSIKGHLLEIDPKTDNS
CCCCCCCCCEEEEECCCCCCEECHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCC
KILNPHQAKEFTDVTGLAVWEDNLWVTRGNSVYVSKLSSLGLEHFVTLPYSADGVAVWES
CCCCCHHHHHHCCCCEEEEEECCEEEEECCEEEEHHHHHCCCEEEEECCCCCCCEEEEEE
TVYVSCHRLGYILIFDRDTRKEITRFYAPGVGVENLVVNGNTLWVCDRTEQTVYSMDRAT
EEEEEEECCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHH
GEVIFSVLTPFESPTGIAVHLDAETGKENLYVAYASEEPYIRDNPNADPNHELTYRDRTF
HHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCEE
IHPLYYHHQPDKHYALSNGYLIEMSYAEEISPLEEVYIPEVEWRIALPSETERQKIRHIE
EEEEEECCCCCCCEEECCCEEEEEECHHHCCCHHHHCCCCEEEEEECCCCHHHHHHHCCC
PIGIPFTEEVIDGQRVALFKFDALVPGERHIFGWKALLEVRGIKYRITPKEVENIPELSP
CCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEHHHHHHHHCCCEEEECHHHHHCCCCCCH
EFQERYLVDDDDLAMDTSIVRRAAEEAVGSETNLLRKMYSIRNYVYDELSYGIKPYIDTP
HHHHCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DIVLERGIGSCGEYVGVLLALCRLNGIPCRTVGRYKCPPQAEQQGVPLQPDFNHVWLEFY
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEE
IPGFGWLPMESNPDDLGRGSQYPTRFFMGLCWYHIEIGKGVSFETISSQGKRLTKDDIPI
ECCEEECCCCCCCCCCCCCCCCHHHHHHHEEEEEEECCCCCCCHHHHHCCCCCCCCCCCC
GDLAINHIRFTIVKELPDF
CCEEHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA