| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230837
Identifier: 17230837
GI number: 17230837
Start: 4042803
End: 4043825
Strand: Direct
Name: 17230837
Synonym: alr3345
Alternate gene names: NA
Gene position: 4042803-4043825 (Clockwise)
Preceding gene: 17230836
Following gene: 17230842
Centisome position: 63.03
GC content: 42.33
Gene sequence:
>1023_bases ATGAATCAAAGCAAATTATCTCAAAATAAGCCTATAATTTTGGGCTTATGTTTACCTGCGATCGCTGCATATTTCACCGT AAATACAGGAACCTTTTCTCTACAACCAGCTAACGCCAAAGAAACACAATCTTTCCAACTAGCACAACAAAGCAGTTCCC CATCCGAAAAAGTCAGAATTGCCGTTCTTGATTTTGATTTTAGTAGCGTCAGTAACCCCAGTTACTTATCACTTTTTCCC GCAGGTAGTAAGGGTGTCAGTGACATCCTCGTCAATCGGTTAGTGAAAAGCGGTAATTTTGTTGTCGTGGAACGTAGCCA ATTAGAAGCTATTTTAAGAGAACAAGATTTAGGTGATTCTGGAAGAGTTGATGCTAGTACAGCCGCAAAAATTGGCCGTA TTTTAGGCGTTGAGGCGGTTGTCATCGGCTCAGTGACTCAATTTGACGTTCAACAACGGCGCTCTGGGGGTGGCTTTTTA GGATTTGGTGCAGCGAGTACCGATACCGATGCTTTGGTCAAATTGAATATTCGTGTAGTCAATACAACTACAGCCGAAAT CTTGTTTGTAGCTGAAGGTAATGGGAATGAGAGCCAGTCCGATACTCAAGTCAGTGTATTGGGTATTGGTGGAGGTTCCT CTACTAGCAACGAAGGCAAATTACTCACCAAAGCCACTGAAAAAGCGATCGATCAAGTCATCACTGAATTGAATACAAAA TCCACCAATTTAGCCGCTTTACCAAAAGCTTTACCCAGCGTTAACGCCACTGTAGCTGATGTCACAGGAAATACTGTGAT TTTAAACAAAGGTAAATCAGACGGTTATCGAGTCGGGATGAAACTTTCCATTGAGCGAGTGACAAAACAAGTGAAAGACC CGACCACAGGTAAAGTTATCCGCAGTGTTACTCAACCATTAGGCATGATTCAACTAGTTGACGTGGATGCTACATCTAGC GTTGGGAAAATCACCACTGGCGGTAAATTCAAAGTTGGAGATATTGCTAAACCTGCACAATAG
Upstream 100 bases:
>100_bases ATTCCAAATAGACGAGACTTGTTTTTTGTTCCCTATTTATGCAAGTAATTTCCCAAAGAAAAGCGGAATATCATAACATT TACTTAATTAGGCTCAACTG
Downstream 100 bases:
>100_bases AATCTTACTTGCATGATTGGCGCGATCGCCTTTTCTTAATTACCTTGTGAAAAACAAGATACCCGACTTTTTTTAAAAGT CGGGTATTTGTGGCTAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: CsgG Family Protein; Curli Production Assembly/Transport Component
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNQSKLSQNKPIILGLCLPAIAAYFTVNTGTFSLQPANAKETQSFQLAQQSSSPSEKVRIAVLDFDFSSVSNPSYLSLFP AGSKGVSDILVNRLVKSGNFVVVERSQLEAILREQDLGDSGRVDASTAAKIGRILGVEAVVIGSVTQFDVQQRRSGGGFL GFGAASTDTDALVKLNIRVVNTTTAEILFVAEGNGNESQSDTQVSVLGIGGGSSTSNEGKLLTKATEKAIDQVITELNTK STNLAALPKALPSVNATVADVTGNTVILNKGKSDGYRVGMKLSIERVTKQVKDPTTGKVIRSVTQPLGMIQLVDVDATSS VGKITTGGKFKVGDIAKPAQ
Sequences:
>Translated_340_residues MNQSKLSQNKPIILGLCLPAIAAYFTVNTGTFSLQPANAKETQSFQLAQQSSSPSEKVRIAVLDFDFSSVSNPSYLSLFP AGSKGVSDILVNRLVKSGNFVVVERSQLEAILREQDLGDSGRVDASTAAKIGRILGVEAVVIGSVTQFDVQQRRSGGGFL GFGAASTDTDALVKLNIRVVNTTTAEILFVAEGNGNESQSDTQVSVLGIGGGSSTSNEGKLLTKATEKAIDQVITELNTK STNLAALPKALPSVNATVADVTGNTVILNKGKSDGYRVGMKLSIERVTKQVKDPTTGKVIRSVTQPLGMIQLVDVDATSS VGKITTGGKFKVGDIAKPAQ >Mature_340_residues MNQSKLSQNKPIILGLCLPAIAAYFTVNTGTFSLQPANAKETQSFQLAQQSSSPSEKVRIAVLDFDFSSVSNPSYLSLFP AGSKGVSDILVNRLVKSGNFVVVERSQLEAILREQDLGDSGRVDASTAAKIGRILGVEAVVIGSVTQFDVQQRRSGGGFL GFGAASTDTDALVKLNIRVVNTTTAEILFVAEGNGNESQSDTQVSVLGIGGGSSTSNEGKLLTKATEKAIDQVITELNTK STNLAALPKALPSVNATVADVTGNTVILNKGKSDGYRVGMKLSIERVTKQVKDPTTGKVIRSVTQPLGMIQLVDVDATSS VGKITTGGKFKVGDIAKPAQ
Specific function: Unknown
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35592; Mature: 35592
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSKLSQNKPIILGLCLPAIAAYFTVNTGTFSLQPANAKETQSFQLAQQSSSPSEKVRI CCCCCCCCCCCEEEEEHHHHHHHEEEEECCEEEECCCCCCCCHHHHHHHCCCCCCCEEEE AVLDFDFSSVSNPSYLSLFPAGSKGVSDILVNRLVKSGNFVVVERSQLEAILREQDLGDS EEEEECHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCC GRVDASTAAKIGRILGVEAVVIGSVTQFDVQQRRSGGGFLGFGAASTDTDALVKLNIRVV CCCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEE NTTTAEILFVAEGNGNESQSDTQVSVLGIGGGSSTSNEGKLLTKATEKAIDQVITELNTK EECEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC STNLAALPKALPSVNATVADVTGNTVILNKGKSDGYRVGMKLSIERVTKQVKDPTTGKVI CCCHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEHHHHHHHHCCCCHHHHH RSVTQPLGMIQLVDVDATSSVGKITTGGKFKVGDIAKPAQ HHHHCCCCEEEEEEECCCCCCCEECCCCCEEECCCCCCCC >Mature Secondary Structure MNQSKLSQNKPIILGLCLPAIAAYFTVNTGTFSLQPANAKETQSFQLAQQSSSPSEKVRI CCCCCCCCCCCEEEEEHHHHHHHEEEEECCEEEECCCCCCCCHHHHHHHCCCCCCCEEEE AVLDFDFSSVSNPSYLSLFPAGSKGVSDILVNRLVKSGNFVVVERSQLEAILREQDLGDS EEEEECHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCC GRVDASTAAKIGRILGVEAVVIGSVTQFDVQQRRSGGGFLGFGAASTDTDALVKLNIRVV CCCCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEE NTTTAEILFVAEGNGNESQSDTQVSVLGIGGGSSTSNEGKLLTKATEKAIDQVITELNTK EECEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC STNLAALPKALPSVNATVADVTGNTVILNKGKSDGYRVGMKLSIERVTKQVKDPTTGKVI CCCHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCEEEEEEEEHHHHHHHHCCCCHHHHH RSVTQPLGMIQLVDVDATSSVGKITTGGKFKVGDIAKPAQ HHHHCCCCEEEEEEECCCCCCCEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA