| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230829
Identifier: 17230829
GI number: 17230829
Start: 4033203
End: 4033550
Strand: Direct
Name: 17230829
Synonym: alr3337
Alternate gene names: NA
Gene position: 4033203-4033550 (Clockwise)
Preceding gene: 17230828
Following gene: 17230830
Centisome position: 62.88
GC content: 42.53
Gene sequence:
>348_bases ATGAAAGCTAGAATTATTGCTGTTTTGGCGATCGCCCTATCTATTGCCAGCTTAGAAAGCCCGGTTCGCGCCCAGACACC AGCAACGCCAAACCCAAATACCCAAGACTATAAGTTAACTGGTGACTCTCTAGAAGGGATTGGTAATCGGTCAGCAGAGG ATGACTTCTCACAATTTTTTAACACCAGTATTCCCACTAATAATATAAGAGACAATCAGAATGTTAGTGGATGGCGGTCA AACCGATCAACTTCATTACCAGATACTCCAGTTTTATTACAGCCAGCACAAGAGTCAGTTAATGGTAATGATGGAGTGCA GGTACAGTTAGATTTAGGAAACCAGTGA
Upstream 100 bases:
>100_bases GCAAATCTTTATTTGTCAAATCTAACTGATAGTAGAAGTTAGAAAGATAGTTTTTTGAAAAAATAGCTACGAGCAATAAC TAAGAATTGGGAACAAACTA
Downstream 100 bases:
>100_bases AAAAATGTCAGTTGTTATTTGTTAGTTGCCAGTAGCATTTATTTGGGCAAGGGTGTAAGTATCCACAACCGTTACACCCT TACACCCTGATTAAATTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKARIIAVLAIALSIASLESPVRAQTPATPNPNTQDYKLTGDSLEGIGNRSAEDDFSQFFNTSIPTNNIRDNQNVSGWRS NRSTSLPDTPVLLQPAQESVNGNDGVQVQLDLGNQ
Sequences:
>Translated_115_residues MKARIIAVLAIALSIASLESPVRAQTPATPNPNTQDYKLTGDSLEGIGNRSAEDDFSQFFNTSIPTNNIRDNQNVSGWRS NRSTSLPDTPVLLQPAQESVNGNDGVQVQLDLGNQ >Mature_115_residues MKARIIAVLAIALSIASLESPVRAQTPATPNPNTQDYKLTGDSLEGIGNRSAEDDFSQFFNTSIPTNNIRDNQNVSGWRS NRSTSLPDTPVLLQPAQESVNGNDGVQVQLDLGNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12381; Mature: 12381
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIIAVLAIALSIASLESPVRAQTPATPNPNTQDYKLTGDSLEGIGNRSAEDDFSQFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHH NTSIPTNNIRDNQNVSGWRSNRSTSLPDTPVLLQPAQESVNGNDGVQVQLDLGNQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MKARIIAVLAIALSIASLESPVRAQTPATPNPNTQDYKLTGDSLEGIGNRSAEDDFSQFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHH NTSIPTNNIRDNQNVSGWRSNRSTSLPDTPVLLQPAQESVNGNDGVQVQLDLGNQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA