| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230783
Identifier: 17230783
GI number: 17230783
Start: 3972087
End: 3972629
Strand: Reverse
Name: 17230783
Synonym: all3291
Alternate gene names: NA
Gene position: 3972629-3972087 (Counterclockwise)
Preceding gene: 17230784
Following gene: 17230782
Centisome position: 61.94
GC content: 43.83
Gene sequence:
>543_bases ATGAAGGGTGTTCTTATCGCTGGTGTGGGTGCATTTGCGCTGATTGCTACCGCACCATTTATCAATCACATCCCAGGAAG TGTAGTTGCTCAAAGCATTCAAAATCAACCACAATTGCAATTGCGCTTAGGGGCGGAAAAACAGGTTATTAGCAAGGATC AGCAGGGGAAACAGAAGGTTGCTTGGCAAGCATTACAAGGTCAAGCTGTGGTCAAGCCTGGGGATGTGTTGCGTTATACC TTAAATGGCGAAAATAAAAGCGATCGCTCAATCAAAAATTTGACTCTCAATCAACCAATCCCTAAAGGCATGGTATATGT GCTGAAATCAGTTGATATTGCCAATAAAGCAGCCAAAATTACTTACAGCATTGACGGCGGGCGCAGTTTTGTTGAGAATC CCACAGTTAAAGTTACCCTCCCTGGGGGTAAGGTCGAAATTAAACCAGCACCAGCTACAGCTTATACCAATATTCGTTTG CAACTGCCATTAGTAGCAGCTAAAACTACAGTCAAAGCGACCTATTTAACCCAGGTGCGTTAA
Upstream 100 bases:
>100_bases GCAAGGTTAACTAAAGTTCTGCACAGTTTGCAGTCAGGACTTAAGTCCTGACTGCAAACATGGGAATCATATATCTAATA GTTTTTTGGGGTTATTTGTC
Downstream 100 bases:
>100_bases TTAATACTAATTCTTAACTGCGAATTACGAATTAGCACTACTAGAAAACATCTAATCAATAGTTAGCCGTTGTTCCAAGT TTCGATAACGACGGCTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKGVLIAGVGAFALIATAPFINHIPGSVVAQSIQNQPQLQLRLGAEKQVISKDQQGKQKVAWQALQGQAVVKPGDVLRYT LNGENKSDRSIKNLTLNQPIPKGMVYVLKSVDIANKAAKITYSIDGGRSFVENPTVKVTLPGGKVEIKPAPATAYTNIRL QLPLVAAKTTVKATYLTQVR
Sequences:
>Translated_180_residues MKGVLIAGVGAFALIATAPFINHIPGSVVAQSIQNQPQLQLRLGAEKQVISKDQQGKQKVAWQALQGQAVVKPGDVLRYT LNGENKSDRSIKNLTLNQPIPKGMVYVLKSVDIANKAAKITYSIDGGRSFVENPTVKVTLPGGKVEIKPAPATAYTNIRL QLPLVAAKTTVKATYLTQVR >Mature_180_residues MKGVLIAGVGAFALIATAPFINHIPGSVVAQSIQNQPQLQLRLGAEKQVISKDQQGKQKVAWQALQGQAVVKPGDVLRYT LNGENKSDRSIKNLTLNQPIPKGMVYVLKSVDIANKAAKITYSIDGGRSFVENPTVKVTLPGGKVEIKPAPATAYTNIRL QLPLVAAKTTVKATYLTQVR
Specific function: Unknown
COG id: COG4719
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19311; Mature: 19311
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVLIAGVGAFALIATAPFINHIPGSVVAQSIQNQPQLQLRLGAEKQVISKDQQGKQKV CCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCHHHH AWQALQGQAVVKPGDVLRYTLNGENKSDRSIKNLTLNQPIPKGMVYVLKSVDIANKAAKI HHHHHCCCEEECCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEHHCCCCCCEEEE TYSIDGGRSFVENPTVKVTLPGGKVEIKPAPATAYTNIRLQLPLVAAKTTVKATYLTQVR EEEECCCCHHHCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECEEEEEEEEEECC >Mature Secondary Structure MKGVLIAGVGAFALIATAPFINHIPGSVVAQSIQNQPQLQLRLGAEKQVISKDQQGKQKV CCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCHHHH AWQALQGQAVVKPGDVLRYTLNGENKSDRSIKNLTLNQPIPKGMVYVLKSVDIANKAAKI HHHHHCCCEEECCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEHHCCCCCCEEEE TYSIDGGRSFVENPTVKVTLPGGKVEIKPAPATAYTNIRLQLPLVAAKTTVKATYLTQVR EEEECCCCHHHCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEEEECEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA