| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230784
Identifier: 17230784
GI number: 17230784
Start: 3972716
End: 3975295
Strand: Reverse
Name: 17230784
Synonym: all3292
Alternate gene names: NA
Gene position: 3975295-3972716 (Counterclockwise)
Preceding gene: 17230787
Following gene: 17230783
Centisome position: 61.98
GC content: 44.22
Gene sequence:
>2580_bases ATGAATTTCCACCAAAAAGCTCACAAGACTGGGAAGTCTCGAATTTACCGTGCTTTAGTCGCCACAGCATTTTTAGCAAG CGGCATTTTCCCATTTACTACGCCTGCACTAGCAGAAGGAACTAAAGCGGGTCAATCTATCACCAACGAAGCAACTGCTA CTTACGAAGACCCCAACAATCCCAACGTACCCCTGAATACAACTTCCAACACTGTCACAGTAACAGTGGCAGAAGTTGCA GGTATTACAGTAGACTACACAGGTTTAGTGGACGATGACGGCGGTACGATTGAAATAAATGATCTCTTAATCTTCAATTA CACCATCACCAACGTCGGTAACGACCCCACCCAGTTCCGTATACCTAATTTGGCAACAACAACAGGGCCTGCAACAGTTT CTGGGACATTACCAAACAACGGTACACTCAATAATCTGCAATATAGTACTGACAACGGCGTAACTTGGGTTAACATCACT GGTTCTGAGGCCATTGTTCCCAACATTGCTGTCGGCGGTCAGGTATTAGTTAGAGTCCCTGTTACTGTACAGCCAGGCGC TCAAAGCGGTGACATCATTACGGTTAGGTTAGGTAATACCCCAGCCAATGCTCAAAACGTCTTGCGTAGTCCTGATGGTG GTGACGTTTATACTGTAGATAACCTCAATGGTAGTGTGACGGATGAAGTTGATGGCGCTCCTGTTAACGGCACTAGAGAA GCTAGTGATACATCTATTGATGTTCAAGTAGGTGGAGGCGTTAAAACCTACTCTTTAGCCACAGTTCTCAAGACACGTAC TGCTTACAGCAATGCGGGAACAACTAATTCCATTACAGATGACACACTTAGTTATGGTCTGAGTTTGCGAGTTGAAGGTA ATGACCCCACAGGACAGGGTATCACTCCAGCAGCCTTGGAAGGTAGGGGTATCAATCTTAATGGAACATCTAATGTCCCG CACATCTTAGTTTCCGATGCCATTCCCACTGGCACAGATTTAGTATCAGTAACAGCTCCCAACGGATGGACAGCAGTATA TACGATATCACCAATTGGGACAGATGCTAATGCTGCGGCGTGGACAACAACACCACCAGGTGACTTGAGTACAGTCACCC GTGTTGGTTTTATCAACAACACAGCTATAGTTACATCTGTTGCACCCAACCAAACAGTTAATGGTTTTACTATTAACTTA AGAGTCGAATCCAGCTTTGCCGGCACATCTTTAAATGTTGCCAACATTGCTCAGTTGTTTGGTCAAACCCCTGGTAATAA CTTCCCTGTCTATGATGAGTCTGGAGACCAAAACCCCAGTAACTTCAATGGTCAATTTGGGAATATGACACCAAATCTAC CTGCTCTTACAGATCTCAATAATGATGGTGTGCCTGATAGTTTACCTGATACCAGTGTTGATGATGGTTTCGTTGATAAT CCAGCTGCCCCAGAAACAGGAGTTGACGGCAATAATGATAATACTGGTGTAGGCGACGGTGGTGAAGCCAACATCTTCAC GCTAGAAGTTCCTGTAGCTTCAGCCATTCTCAATGGCCCAGTCAATGCTCCTAATGCCATTGGCCCATCTGGTGGTACAA ACGATGACTTCACTAACAAATCTTCTTTAGTACCTTTCGGCACACAACCAAACTCTACACTAAATCCACAACCAGTAGCC TTTACCAACACTATCAGAAATAGCGGTAGCGCTGCTAGTGACTACTCTTTAGTACCCATCCCACCAGCAAGTAATACACC TGCTGGAAACAATGCTGATTTACCTGTAGGTACTTTAGTAACGATTACTTATGCTTCTGAATCTAGATCCTATGTCTGGA CTGGATCTGAGTTCCTTTTTGATCTAGATCGCAATCCGGCTACAACAGGTGATCAATCCACCATTAATCTCACAAGTGAA TACATCACTATTCCTAGTGTAGCACCAGGTACAAACATCAACTACGGTGTGGAAATTGACTTACCTGATGGTACTCAATT ATCTACAGATATTGATAAAGGTTTCCCCGTTCCTGTGACAGCCTTTGTGGATGATGGGACTGCTGGCTTAAATGGAGAAG CTGTACAAAATACTACAATTAACCGTGTATATACTGGCTTCCTGAAACTGCGGAAACTTTCCAGAATCTTAGATCAAAAT GGGCAACCTGTAGCCGGGGCTGATGGCATACTTAGCGATACTGACAAGAGTCCTGTACCTGGTAACATTATTGAGTACCA GATTCAATACAGCAACATCTCTGAGCCACAATCTGGTAACGGTAACATCATCCTGAACGCCAGCAATGTTGTCATCAATG AAAATGGGGTAACTGCGCCTAATAACTGGGCGTTAGACAATGATAGTAATGGTCAGATTGATACCAGCAACATTATTGGT TCAGCTACTGACCCCAATGGTACTATCCAATTCTTCAATGGTAATCCTGCTACTACCTCAGGTAGTGATCAGACTGGAAC TACCGTCAACACTGATGTGACTCGGTATGTCAACAGTGTGACTGGTCAAGTAGCACCAGGTCAACAAAGAACGTTTACTT TCCGACGCAAGGTTAACTAA
Upstream 100 bases:
>100_bases CGACACAAATTACACCAATAGGTTCTCTATCTCAGGCATACTTTACACCACTTTTTCTCGAAATCTACCAGGCAGCACTC TAACCAAGTAACTACACCAA
Downstream 100 bases:
>100_bases AGTTCTGCACAGTTTGCAGTCAGGACTTAAGTCCTGACTGCAAACATGGGAATCATATATCTAATAGTTTTTTGGGGTTA TTTGTCATGAAGGGTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 859; Mature: 859
Protein sequence:
>859_residues MNFHQKAHKTGKSRIYRALVATAFLASGIFPFTTPALAEGTKAGQSITNEATATYEDPNNPNVPLNTTSNTVTVTVAEVA GITVDYTGLVDDDGGTIEINDLLIFNYTITNVGNDPTQFRIPNLATTTGPATVSGTLPNNGTLNNLQYSTDNGVTWVNIT GSEAIVPNIAVGGQVLVRVPVTVQPGAQSGDIITVRLGNTPANAQNVLRSPDGGDVYTVDNLNGSVTDEVDGAPVNGTRE ASDTSIDVQVGGGVKTYSLATVLKTRTAYSNAGTTNSITDDTLSYGLSLRVEGNDPTGQGITPAALEGRGINLNGTSNVP HILVSDAIPTGTDLVSVTAPNGWTAVYTISPIGTDANAAAWTTTPPGDLSTVTRVGFINNTAIVTSVAPNQTVNGFTINL RVESSFAGTSLNVANIAQLFGQTPGNNFPVYDESGDQNPSNFNGQFGNMTPNLPALTDLNNDGVPDSLPDTSVDDGFVDN PAAPETGVDGNNDNTGVGDGGEANIFTLEVPVASAILNGPVNAPNAIGPSGGTNDDFTNKSSLVPFGTQPNSTLNPQPVA FTNTIRNSGSAASDYSLVPIPPASNTPAGNNADLPVGTLVTITYASESRSYVWTGSEFLFDLDRNPATTGDQSTINLTSE YITIPSVAPGTNINYGVEIDLPDGTQLSTDIDKGFPVPVTAFVDDGTAGLNGEAVQNTTINRVYTGFLKLRKLSRILDQN GQPVAGADGILSDTDKSPVPGNIIEYQIQYSNISEPQSGNGNIILNASNVVINENGVTAPNNWALDNDSNGQIDTSNIIG SATDPNGTIQFFNGNPATTSGSDQTGTTVNTDVTRYVNSVTGQVAPGQQRTFTFRRKVN
Sequences:
>Translated_859_residues MNFHQKAHKTGKSRIYRALVATAFLASGIFPFTTPALAEGTKAGQSITNEATATYEDPNNPNVPLNTTSNTVTVTVAEVA GITVDYTGLVDDDGGTIEINDLLIFNYTITNVGNDPTQFRIPNLATTTGPATVSGTLPNNGTLNNLQYSTDNGVTWVNIT GSEAIVPNIAVGGQVLVRVPVTVQPGAQSGDIITVRLGNTPANAQNVLRSPDGGDVYTVDNLNGSVTDEVDGAPVNGTRE ASDTSIDVQVGGGVKTYSLATVLKTRTAYSNAGTTNSITDDTLSYGLSLRVEGNDPTGQGITPAALEGRGINLNGTSNVP HILVSDAIPTGTDLVSVTAPNGWTAVYTISPIGTDANAAAWTTTPPGDLSTVTRVGFINNTAIVTSVAPNQTVNGFTINL RVESSFAGTSLNVANIAQLFGQTPGNNFPVYDESGDQNPSNFNGQFGNMTPNLPALTDLNNDGVPDSLPDTSVDDGFVDN PAAPETGVDGNNDNTGVGDGGEANIFTLEVPVASAILNGPVNAPNAIGPSGGTNDDFTNKSSLVPFGTQPNSTLNPQPVA FTNTIRNSGSAASDYSLVPIPPASNTPAGNNADLPVGTLVTITYASESRSYVWTGSEFLFDLDRNPATTGDQSTINLTSE YITIPSVAPGTNINYGVEIDLPDGTQLSTDIDKGFPVPVTAFVDDGTAGLNGEAVQNTTINRVYTGFLKLRKLSRILDQN GQPVAGADGILSDTDKSPVPGNIIEYQIQYSNISEPQSGNGNIILNASNVVINENGVTAPNNWALDNDSNGQIDTSNIIG SATDPNGTIQFFNGNPATTSGSDQTGTTVNTDVTRYVNSVTGQVAPGQQRTFTFRRKVN >Mature_859_residues MNFHQKAHKTGKSRIYRALVATAFLASGIFPFTTPALAEGTKAGQSITNEATATYEDPNNPNVPLNTTSNTVTVTVAEVA GITVDYTGLVDDDGGTIEINDLLIFNYTITNVGNDPTQFRIPNLATTTGPATVSGTLPNNGTLNNLQYSTDNGVTWVNIT GSEAIVPNIAVGGQVLVRVPVTVQPGAQSGDIITVRLGNTPANAQNVLRSPDGGDVYTVDNLNGSVTDEVDGAPVNGTRE ASDTSIDVQVGGGVKTYSLATVLKTRTAYSNAGTTNSITDDTLSYGLSLRVEGNDPTGQGITPAALEGRGINLNGTSNVP HILVSDAIPTGTDLVSVTAPNGWTAVYTISPIGTDANAAAWTTTPPGDLSTVTRVGFINNTAIVTSVAPNQTVNGFTINL RVESSFAGTSLNVANIAQLFGQTPGNNFPVYDESGDQNPSNFNGQFGNMTPNLPALTDLNNDGVPDSLPDTSVDDGFVDN PAAPETGVDGNNDNTGVGDGGEANIFTLEVPVASAILNGPVNAPNAIGPSGGTNDDFTNKSSLVPFGTQPNSTLNPQPVA FTNTIRNSGSAASDYSLVPIPPASNTPAGNNADLPVGTLVTITYASESRSYVWTGSEFLFDLDRNPATTGDQSTINLTSE YITIPSVAPGTNINYGVEIDLPDGTQLSTDIDKGFPVPVTAFVDDGTAGLNGEAVQNTTINRVYTGFLKLRKLSRILDQN GQPVAGADGILSDTDKSPVPGNIIEYQIQYSNISEPQSGNGNIILNASNVVINENGVTAPNNWALDNDSNGQIDTSNIIG SATDPNGTIQFFNGNPATTSGSDQTGTTVNTDVTRYVNSVTGQVAPGQQRTFTFRRKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89136; Mature: 89136
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFHQKAHKTGKSRIYRALVATAFLASGIFPFTTPALAEGTKAGQSITNEATATYEDPNN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCC PNVPLNTTSNTVTVTVAEVAGITVDYTGLVDDDGGTIEINDLLIFNYTITNVGNDPTQFR CCCCEECCCCEEEEEEEHCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCEEE IPNLATTTGPATVSGTLPNNGTLNNLQYSTDNGVTWVNITGSEAIVPNIAVGGQVLVRVP CCCCEECCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCEECCEEECCCEEEEEEE VTVQPGAQSGDIITVRLGNTPANAQNVLRSPDGGDVYTVDNLNGSVTDEVDGAPVNGTRE EEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC ASDTSIDVQVGGGVKTYSLATVLKTRTAYSNAGTTNSITDDTLSYGLSLRVEGNDPTGQG CCCCEEEEEECCCEEEEEHEEHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCC ITPAALEGRGINLNGTSNVPHILVSDAIPTGTDLVSVTAPNGWTAVYTISPIGTDANAAA CCCHHCCCCCEECCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCE WTTTPPGDLSTVTRVGFINNTAIVTSVAPNQTVNGFTINLRVESSFAGTSLNVANIAQLF EECCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH GQTPGNNFPVYDESGDQNPSNFNGQFGNMTPNLPALTDLNNDGVPDSLPDTSVDDGFVDN CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC PAAPETGVDGNNDNTGVGDGGEANIFTLEVPVASAILNGPVNAPNAIGPSGGTNDDFTNK CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SSLVPFGTQPNSTLNPQPVAFTNTIRNSGSAASDYSLVPIPPASNTPAGNNADLPVGTLV CCEEECCCCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE TITYASESRSYVWTGSEFLFDLDRNPATTGDQSTINLTSEYITIPSVAPGTNINYGVEID EEEEECCCCCEEEECCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE LPDGTQLSTDIDKGFPVPVTAFVDDGTAGLNGEAVQNTTINRVYTGFLKLRKLSRILDQN CCCCCEECCHHCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCC GQPVAGADGILSDTDKSPVPGNIIEYQIQYSNISEPQSGNGNIILNASNVVINENGVTAP CCEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECEEEECCCCCCCC NNWALDNDSNGQIDTSNIIGSATDPNGTIQFFNGNPATTSGSDQTGTTVNTDVTRYVNSV CCCCCCCCCCCCEEHHHEEECCCCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHH TGQVAPGQQRTFTFRRKVN CCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNFHQKAHKTGKSRIYRALVATAFLASGIFPFTTPALAEGTKAGQSITNEATATYEDPNN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCC PNVPLNTTSNTVTVTVAEVAGITVDYTGLVDDDGGTIEINDLLIFNYTITNVGNDPTQFR CCCCEECCCCEEEEEEEHCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCEEE IPNLATTTGPATVSGTLPNNGTLNNLQYSTDNGVTWVNITGSEAIVPNIAVGGQVLVRVP CCCCEECCCCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCEECCEEECCCEEEEEEE VTVQPGAQSGDIITVRLGNTPANAQNVLRSPDGGDVYTVDNLNGSVTDEVDGAPVNGTRE EEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC ASDTSIDVQVGGGVKTYSLATVLKTRTAYSNAGTTNSITDDTLSYGLSLRVEGNDPTGQG CCCCEEEEEECCCEEEEEHEEHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCC ITPAALEGRGINLNGTSNVPHILVSDAIPTGTDLVSVTAPNGWTAVYTISPIGTDANAAA CCCHHCCCCCEECCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCE WTTTPPGDLSTVTRVGFINNTAIVTSVAPNQTVNGFTINLRVESSFAGTSLNVANIAQLF EECCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH GQTPGNNFPVYDESGDQNPSNFNGQFGNMTPNLPALTDLNNDGVPDSLPDTSVDDGFVDN CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC PAAPETGVDGNNDNTGVGDGGEANIFTLEVPVASAILNGPVNAPNAIGPSGGTNDDFTNK CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SSLVPFGTQPNSTLNPQPVAFTNTIRNSGSAASDYSLVPIPPASNTPAGNNADLPVGTLV CCEEECCCCCCCCCCCCCEEEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE TITYASESRSYVWTGSEFLFDLDRNPATTGDQSTINLTSEYITIPSVAPGTNINYGVEID EEEEECCCCCEEEECCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEE LPDGTQLSTDIDKGFPVPVTAFVDDGTAGLNGEAVQNTTINRVYTGFLKLRKLSRILDQN CCCCCEECCHHCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCC GQPVAGADGILSDTDKSPVPGNIIEYQIQYSNISEPQSGNGNIILNASNVVINENGVTAP CCEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECEEEECCCCCCCC NNWALDNDSNGQIDTSNIIGSATDPNGTIQFFNGNPATTSGSDQTGTTVNTDVTRYVNSV CCCCCCCCCCCCEEHHHEEECCCCCCCEEEEECCCCCCCCCCCCCCCEECHHHHHHHHHH TGQVAPGQQRTFTFRRKVN CCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA