| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230756
Identifier: 17230756
GI number: 17230756
Start: 3936264
End: 3936458
Strand: Reverse
Name: 17230756
Synonym: asl3264
Alternate gene names: NA
Gene position: 3936458-3936264 (Counterclockwise)
Preceding gene: 17230759
Following gene: 17230755
Centisome position: 61.38
GC content: 45.64
Gene sequence:
>195_bases ATGTTATACAAGTCCAACGAAGACTTGCCTTTAGAAGTCCGCGCTCAACTATCGCAGTCTCATCAAGACCTTTATCGGGC AGCTTTTAACTCGGCAATCCATTGGTATGGGGAAGTTTCAAAAGCCCATCATGTTGCTTCAAGCGCTGTCAGGATGCAGT CGGCTATGGATAGGACTGTTGTTTTACAAGGATGA
Upstream 100 bases:
>100_bases CCTAACAATGGGCAACAAAAAAAGCTCTATCTCAGGATAGGGTTAAAAATCGCCTAGAACTTCTATCGTATAAAATAAGC AGAACCAAAAAAATAACAAT
Downstream 100 bases:
>100_bases AAAATTTTACTCGAAAAAATCATGCCAGCTGCTCTATACAGAATGGTATCGTGAAACTATGAATCATTCTCATTAAATTT AGCTGGTATGTCCTTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MLYKSNEDLPLEVRAQLSQSHQDLYRAAFNSAIHWYGEVSKAHHVASSAVRMQSAMDRTVVLQG
Sequences:
>Translated_64_residues MLYKSNEDLPLEVRAQLSQSHQDLYRAAFNSAIHWYGEVSKAHHVASSAVRMQSAMDRTVVLQG >Mature_64_residues MLYKSNEDLPLEVRAQLSQSHQDLYRAAFNSAIHWYGEVSKAHHVASSAVRMQSAMDRTVVLQG
Specific function: Unknown
COG id: COG4572
COG function: function code R; Putative cation transport regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7230; Mature: 7230
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKSNEDLPLEVRAQLSQSHQDLYRAAFNSAIHWYGEVSKAHHVASSAVRMQSAMDRTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VLQG EECC >Mature Secondary Structure MLYKSNEDLPLEVRAQLSQSHQDLYRAAFNSAIHWYGEVSKAHHVASSAVRMQSAMDRTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE VLQG EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA