Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17230700

Identifier: 17230700

GI number: 17230700

Start: 3876198

End: 3877382

Strand: Reverse

Name: 17230700

Synonym: all3208

Alternate gene names: NA

Gene position: 3877382-3876198 (Counterclockwise)

Preceding gene: 17230701

Following gene: 17230699

Centisome position: 60.45

GC content: 33.84

Gene sequence:

>1185_bases
ATGAAAATAATTAGAAAAAACTTAAATTGGCGAACATTTATTTTTTTTACCATTGGAATTTTAATTACCAGCTTATTCTT
TACAAATTTAGTTACAGACGCTGTAGAAATTAGTAGTATAGAATTTATTGGGCAAGCTACCTTACCAAAAAGACTATCTT
TTCAAAATACCCCGTTAGGTGGGCTATCAGGTATCACCTATGATTATAGTAATGACCTTTATTATGCTATTTCCGATGAT
AGGGGACAAAAAGCACCAACGCGCTTCTACACCTTCAAAATTGATTTAAGTCAAGGTAAATTACAAGATAGTAGCGTTGT
CCCTGTAGGTGTGACAACTTTATTAAATGAAAATGGTCAACCCTTTGTCCCTGGGGAAACAGATACAGAAGGAATTGCTG
TCACTAAAGCAGAAACAGTATTCGTTTCTTCTGAGGGTGATGTGGGGAATTTAACTAATCCTTTTATCAAAGAATTTCCT
TTATCATCAGGTAAGGTAAGTAGAAGTCTACCCATCCTCAAGAAGTTTTTACCGGATAAAAATGGTAAACAAGGTATTCG
TAATAATTTAGCATTTGAAAGTTTAACAATTACACCTAATAACAAATACTTATTTACAGCTACGGAAAATGCTTTAATTC
AAGATGGGGAAGCAGCACAACCTAACATTGGTAGCCCTTGCAGAATTTTGCAATATAACTTACGAAATAATCAACCAGAA
AAAGAATTTCTCTACTCAACAGAACCCATATCACCTTTTTTAAATTTAACAGGTAAATTCGCCAGTGGATTAACCGATTT
AATAGCATTGGATAATCATGGACACTTTGTGAGTATAGAACGTTCCTTTGCTGGTTTAGGATTTGGTGTTGCTTTATTTA
AAGTTTCTCTCTCAGGTGCTGATAACATCCAAAAGATAAATAGCTTATTAACAATAAACTCTAAAAGCATCAAGCCAGTT
GAGAAAGAATTACTCTTAGATTTAAGAACCTTAGATGTAGCACTAGATAACATAGAAGGCTTAACCATTGGGCCTTGGCT
ACCTAATGGACAAAAAGCGTTAATCCTCATTAGTGATAATAATTTTAATTCCATACAACGCAGCCAAATCCTCGCCTTCC
AACTCAAAATAGAATCACCTTTTATCAGCTTATTACGGCGAATAGTAGCAAATTTTAAACTTTAA

Upstream 100 bases:

>100_bases
ATTTACGACGTGTGGGTTAAAAATTGGGAGTCAGGAGTTTCATTGTGTCTTAGTGGTAAAAAGAATCAACCACTAAGAGA
AAAAGACCAAGCAAGAAAAT

Downstream 100 bases:

>100_bases
ATTTCTATAAAAGACCAAACCACGAACCTAACAAAACTTTTTATTGTCAAATTCTGACCCTAATATTAGCTGTTGTCAGT
AAAATTACTGTTGATTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKIIRKNLNWRTFIFFTIGILITSLFFTNLVTDAVEISSIEFIGQATLPKRLSFQNTPLGGLSGITYDYSNDLYYAISDD
RGQKAPTRFYTFKIDLSQGKLQDSSVVPVGVTTLLNENGQPFVPGETDTEGIAVTKAETVFVSSEGDVGNLTNPFIKEFP
LSSGKVSRSLPILKKFLPDKNGKQGIRNNLAFESLTITPNNKYLFTATENALIQDGEAAQPNIGSPCRILQYNLRNNQPE
KEFLYSTEPISPFLNLTGKFASGLTDLIALDNHGHFVSIERSFAGLGFGVALFKVSLSGADNIQKINSLLTINSKSIKPV
EKELLLDLRTLDVALDNIEGLTIGPWLPNGQKALILISDNNFNSIQRSQILAFQLKIESPFISLLRRIVANFKL

Sequences:

>Translated_394_residues
MKIIRKNLNWRTFIFFTIGILITSLFFTNLVTDAVEISSIEFIGQATLPKRLSFQNTPLGGLSGITYDYSNDLYYAISDD
RGQKAPTRFYTFKIDLSQGKLQDSSVVPVGVTTLLNENGQPFVPGETDTEGIAVTKAETVFVSSEGDVGNLTNPFIKEFP
LSSGKVSRSLPILKKFLPDKNGKQGIRNNLAFESLTITPNNKYLFTATENALIQDGEAAQPNIGSPCRILQYNLRNNQPE
KEFLYSTEPISPFLNLTGKFASGLTDLIALDNHGHFVSIERSFAGLGFGVALFKVSLSGADNIQKINSLLTINSKSIKPV
EKELLLDLRTLDVALDNIEGLTIGPWLPNGQKALILISDNNFNSIQRSQILAFQLKIESPFISLLRRIVANFKL
>Mature_394_residues
MKIIRKNLNWRTFIFFTIGILITSLFFTNLVTDAVEISSIEFIGQATLPKRLSFQNTPLGGLSGITYDYSNDLYYAISDD
RGQKAPTRFYTFKIDLSQGKLQDSSVVPVGVTTLLNENGQPFVPGETDTEGIAVTKAETVFVSSEGDVGNLTNPFIKEFP
LSSGKVSRSLPILKKFLPDKNGKQGIRNNLAFESLTITPNNKYLFTATENALIQDGEAAQPNIGSPCRILQYNLRNNQPE
KEFLYSTEPISPFLNLTGKFASGLTDLIALDNHGHFVSIERSFAGLGFGVALFKVSLSGADNIQKINSLLTINSKSIKPV
EKELLLDLRTLDVALDNIEGLTIGPWLPNGQKALILISDNNFNSIQRSQILAFQLKIESPFISLLRRIVANFKL

Specific function: Unknown

COG id: COG4222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43520; Mature: 43520

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIRKNLNWRTFIFFTIGILITSLFFTNLVTDAVEISSIEFIGQATLPKRLSFQNTPLG
CCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
GLSGITYDYSNDLYYAISDDRGQKAPTRFYTFKIDLSQGKLQDSSVVPVGVTTLLNENGQ
CCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHEEECCCCC
PFVPGETDTEGIAVTKAETVFVSSEGDVGNLTNPFIKEFPLSSGKVSRSLPILKKFLPDK
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCC
NGKQGIRNNLAFESLTITPNNKYLFTATENALIQDGEAAQPNIGSPCRILQYNLRNNQPE
CCCHHHHHCCCEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCCCCH
KEFLYSTEPISPFLNLTGKFASGLTDLIALDNHGHFVSIERSFAGLGFGVALFKVSLSGA
HHHEECCCCCCHHHHCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCC
DNIQKINSLLTINSKSIKPVEKELLLDLRTLDVALDNIEGLTIGPWLPNGQKALILISDN
CHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECC
NFNSIQRSQILAFQLKIESPFISLLRRIVANFKL
CCCCHHHCEEEEEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIIRKNLNWRTFIFFTIGILITSLFFTNLVTDAVEISSIEFIGQATLPKRLSFQNTPLG
CCCEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
GLSGITYDYSNDLYYAISDDRGQKAPTRFYTFKIDLSQGKLQDSSVVPVGVTTLLNENGQ
CCCCEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHEEECCCCC
PFVPGETDTEGIAVTKAETVFVSSEGDVGNLTNPFIKEFPLSSGKVSRSLPILKKFLPDK
CCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCC
NGKQGIRNNLAFESLTITPNNKYLFTATENALIQDGEAAQPNIGSPCRILQYNLRNNQPE
CCCHHHHHCCCEEEEEECCCCCEEEEECCCCEECCCCCCCCCCCCCEEEEEEECCCCCCH
KEFLYSTEPISPFLNLTGKFASGLTDLIALDNHGHFVSIERSFAGLGFGVALFKVSLSGA
HHHEECCCCCCHHHHCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCC
DNIQKINSLLTINSKSIKPVEKELLLDLRTLDVALDNIEGLTIGPWLPNGQKALILISDN
CHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEECC
NFNSIQRSQILAFQLKIESPFISLLRRIVANFKL
CCCCHHHCEEEEEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA