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The map label for this gene is 17230701

Identifier: 17230701

GI number: 17230701

Start: 3877463

End: 3878947

Strand: Reverse

Name: 17230701

Synonym: all3209

Alternate gene names: NA

Gene position: 3878947-3877463 (Counterclockwise)

Preceding gene: 17230703

Following gene: 17230700

Centisome position: 60.48

GC content: 41.41

Gene sequence:

>1485_bases
ATGCTAATTAATGCTGAACACTTGCTGCAATACCAACGCTGTAAACGCCGTCCTATTTTAGATATTCACGCTGATAGAAG
CCAACGGGATGCGCCTAGTGAATTGTTGCTGAAATTGCAACAAGATAAATATGCTCATCAACACAGTATCTTGGCTAAAT
TTGCATATCATCAGCCAGAATATCCCAAAAGGAATTGGGAAGCAGGTCAAGCCGCCACCATAGAATTGATGCAGCGTGGA
GTTGAGTATATTTATCAGGGAGTATTGTTAGCTAATTACAACGAGTTAATAGATACGGATGATACAAGATATACCTGCTT
GAGTCGTCCCGATTTGTTAATCAAACAACCCGGACAGTCCAAATTTGGTGATTGGGTATATGAACCAGTGGATATAGAAT
TGGGTAAGCGTCCCAAACAAGAATATCAAGTAGTAACAGCCTTCCATACCCAAATTTTGGCAAAAGTACAGGAAGTTCAG
CCAAAGAATGCTTGGTTGATGTTACGGGGTAAAGAGACACCGTATGCAGTAGATTTATTTAAATGGATACCCCAAATGCA
GGGGATTTTACAAGAATTTACTCAAGACCTAGAATCGGAGACTGCGCCAGAAGTATTTATTGCCCGTCAAAAGTGTAATC
TTTGTCTTTGGCACAGTCAATGTTATGCGATCGCTCAATCTGAACAACACCTCTCCTTGTTACCAGGCGTAACACCCATC
CGTTACACCCAACTGCAAAACCTTGACATCACCAGTGTAGAATCTCTCGCCCATACCAGCCCAAATATTTTAGAAAATCT
CGTAGGTTTTGATACTCAAGTTGCAGCCAAGTTAGTAGTACAAGCCCAATCAGTCGTAGAAGGACAACCACTTCTTTTAC
CCTTCCCACCACCCAAGGGAAATCTGGTAGTCAACTCACCCGTAGAAATATACTTTGATATTGAAGCGCAGCCAGACTTA
AATTTAGATTATCTGTTAGGGGTTTTGGTCGTTAACAAACAAACCAACACCGAACAATTTTATTCTTTCGTTGCTGAAAA
ACCATCAGAAGAAGAATTAATTTGGCGACAGTTTCTAGACTTAGTGTGGCAATATCCCGAAGCCCCAATTTATCATTTTT
GTGTGTACGAATTAGATACAGTTAAACGCCTAGCCAAGCTATACCGTACACCTTACACCTCAGTCAGCCCAGTATTATAT
AGATTTGTCGATATTTATGAACACCTCACCCAAAGTGTGGCTTTACCTATAGAAAGTTATGCCTTAAAAGCCATCGCGCG
GTGGATGGGTTTCGAGTGGCGTGATAAAGAAGCTAGTGGTGCTAAGTGTATATATTGGTATGATCAGTGGTTAGAAACAG
GCGATCGCGCCTTATTGGAAATCATTATCCGCTATAACGAAGACGACTGCCGAGCCACCCGCAAAGTTAAAGATTGGCTC
GTCAACTTTGTTCAAGACAAGTATCATTTACGACGTGTGGGTTAA

Upstream 100 bases:

>100_bases
AAATTAGAATTCAAAATAGTCATTAGTCCATAGTCTATAGTCAATAGTCCCCAATCCCCAATCCCCAATCCCCAATCCCC
AATCCCCAATCCCCAAATGA

Downstream 100 bases:

>100_bases
AAATTGGGAGTCAGGAGTTTCATTGTGTCTTAGTGGTAAAAAGAATCAACCACTAAGAGAAAAAGACCAAGCAAGAAAAT
ATGAAAATAATTAGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: RecB Family-Like Nuclease; ATPase; Nuclease; Transposase; Transposase IS; AAA ATPase; DNA Repair Protein; Nuclease-Like Protein; RNA Helicase; Superfamily I DNA/RNA Helicase

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MLINAEHLLQYQRCKRRPILDIHADRSQRDAPSELLLKLQQDKYAHQHSILAKFAYHQPEYPKRNWEAGQAATIELMQRG
VEYIYQGVLLANYNELIDTDDTRYTCLSRPDLLIKQPGQSKFGDWVYEPVDIELGKRPKQEYQVVTAFHTQILAKVQEVQ
PKNAWLMLRGKETPYAVDLFKWIPQMQGILQEFTQDLESETAPEVFIARQKCNLCLWHSQCYAIAQSEQHLSLLPGVTPI
RYTQLQNLDITSVESLAHTSPNILENLVGFDTQVAAKLVVQAQSVVEGQPLLLPFPPPKGNLVVNSPVEIYFDIEAQPDL
NLDYLLGVLVVNKQTNTEQFYSFVAEKPSEEELIWRQFLDLVWQYPEAPIYHFCVYELDTVKRLAKLYRTPYTSVSPVLY
RFVDIYEHLTQSVALPIESYALKAIARWMGFEWRDKEASGAKCIYWYDQWLETGDRALLEIIIRYNEDDCRATRKVKDWL
VNFVQDKYHLRRVG

Sequences:

>Translated_494_residues
MLINAEHLLQYQRCKRRPILDIHADRSQRDAPSELLLKLQQDKYAHQHSILAKFAYHQPEYPKRNWEAGQAATIELMQRG
VEYIYQGVLLANYNELIDTDDTRYTCLSRPDLLIKQPGQSKFGDWVYEPVDIELGKRPKQEYQVVTAFHTQILAKVQEVQ
PKNAWLMLRGKETPYAVDLFKWIPQMQGILQEFTQDLESETAPEVFIARQKCNLCLWHSQCYAIAQSEQHLSLLPGVTPI
RYTQLQNLDITSVESLAHTSPNILENLVGFDTQVAAKLVVQAQSVVEGQPLLLPFPPPKGNLVVNSPVEIYFDIEAQPDL
NLDYLLGVLVVNKQTNTEQFYSFVAEKPSEEELIWRQFLDLVWQYPEAPIYHFCVYELDTVKRLAKLYRTPYTSVSPVLY
RFVDIYEHLTQSVALPIESYALKAIARWMGFEWRDKEASGAKCIYWYDQWLETGDRALLEIIIRYNEDDCRATRKVKDWL
VNFVQDKYHLRRVG
>Mature_494_residues
MLINAEHLLQYQRCKRRPILDIHADRSQRDAPSELLLKLQQDKYAHQHSILAKFAYHQPEYPKRNWEAGQAATIELMQRG
VEYIYQGVLLANYNELIDTDDTRYTCLSRPDLLIKQPGQSKFGDWVYEPVDIELGKRPKQEYQVVTAFHTQILAKVQEVQ
PKNAWLMLRGKETPYAVDLFKWIPQMQGILQEFTQDLESETAPEVFIARQKCNLCLWHSQCYAIAQSEQHLSLLPGVTPI
RYTQLQNLDITSVESLAHTSPNILENLVGFDTQVAAKLVVQAQSVVEGQPLLLPFPPPKGNLVVNSPVEIYFDIEAQPDL
NLDYLLGVLVVNKQTNTEQFYSFVAEKPSEEELIWRQFLDLVWQYPEAPIYHFCVYELDTVKRLAKLYRTPYTSVSPVLY
RFVDIYEHLTQSVALPIESYALKAIARWMGFEWRDKEASGAKCIYWYDQWLETGDRALLEIIIRYNEDDCRATRKVKDWL
VNFVQDKYHLRRVG

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57578; Mature: 57578

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINAEHLLQYQRCKRRPILDIHADRSQRDAPSELLLKLQQDKYAHQHSILAKFAYHQPE
CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YPKRNWEAGQAATIELMQRGVEYIYQGVLLANYNELIDTDDTRYTCLSRPDLLIKQPGQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEEECCCCC
KFGDWVYEPVDIELGKRPKQEYQVVTAFHTQILAKVQEVQPKNAWLMLRGKETPYAVDLF
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
KWIPQMQGILQEFTQDLESETAPEVFIARQKCNLCLWHSQCYAIAQSEQHLSLLPGVTPI
HHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCEEEEEHHHHHHHCCCCHHHHCCCCCCE
RYTQLQNLDITSVESLAHTSPNILENLVGFDTQVAAKLVVQAQSVVEGQPLLLPFPPPKG
EEHEECCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
NLVVNSPVEIYFDIEAQPDLNLDYLLGVLVVNKQTNTEQFYSFVAEKPSEEELIWRQFLD
CEEECCCEEEEEEEECCCCCCHHHHEEEHEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LVWQYPEAPIYHFCVYELDTVKRLAKLYRTPYTSVSPVLYRFVDIYEHLTQSVALPIESY
HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
ALKAIARWMGFEWRDKEASGAKCIYWYDQWLETGDRALLEIIIRYNEDDCRATRKVKDWL
HHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
VNFVQDKYHLRRVG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLINAEHLLQYQRCKRRPILDIHADRSQRDAPSELLLKLQQDKYAHQHSILAKFAYHQPE
CCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YPKRNWEAGQAATIELMQRGVEYIYQGVLLANYNELIDTDDTRYTCLSRPDLLIKQPGQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEEECCCCC
KFGDWVYEPVDIELGKRPKQEYQVVTAFHTQILAKVQEVQPKNAWLMLRGKETPYAVDLF
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
KWIPQMQGILQEFTQDLESETAPEVFIARQKCNLCLWHSQCYAIAQSEQHLSLLPGVTPI
HHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCEEEEEHHHHHHHCCCCHHHHCCCCCCE
RYTQLQNLDITSVESLAHTSPNILENLVGFDTQVAAKLVVQAQSVVEGQPLLLPFPPPKG
EEHEECCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
NLVVNSPVEIYFDIEAQPDLNLDYLLGVLVVNKQTNTEQFYSFVAEKPSEEELIWRQFLD
CEEECCCEEEEEEEECCCCCCHHHHEEEHEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
LVWQYPEAPIYHFCVYELDTVKRLAKLYRTPYTSVSPVLYRFVDIYEHLTQSVALPIESY
HHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
ALKAIARWMGFEWRDKEASGAKCIYWYDQWLETGDRALLEIIIRYNEDDCRATRKVKDWL
HHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
VNFVQDKYHLRRVG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA