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The map label for this gene is 17230682

Identifier: 17230682

GI number: 17230682

Start: 3859947

End: 3860099

Strand: Reverse

Name: 17230682

Synonym: asl3190

Alternate gene names: NA

Gene position: 3860099-3859947 (Counterclockwise)

Preceding gene: 17230683

Following gene: 17230678

Centisome position: 60.18

GC content: 33.33

Gene sequence:

>153_bases
ATGAATAAATCACAAGATAAAGAGAAAAAATATTTCCTCGAATATCTCTCTCTGGCACCAGTTCTTGCTGTTATATCCAT
ATCAGTTGCCTTTTCTACATGGGCAATTTTTAACTATATTTTTCCCGATCTTCTTTTCCATCCTCTACCATAA

Upstream 100 bases:

>100_bases
TACAATTTTCCTACTTTTGATAGTATTAACTATTCTTTTGATAGAGTTTTCAGTAAAAAGTAGTCAGTACCATCTTAAGT
GTTAATTTGATATTTATTAT

Downstream 100 bases:

>100_bases
GGAGTTTTAGGGAAACACCTTCCCTAATAAATTTTGTATATGTCTTCCCAAAAGTTTTCTGACGCTCATCAGCATAATTT
ACATAGTCGTATTCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MNKSQDKEKKYFLEYLSLAPVLAVISISVAFSTWAIFNYIFPDLLFHPLP

Sequences:

>Translated_50_residues
MNKSQDKEKKYFLEYLSLAPVLAVISISVAFSTWAIFNYIFPDLLFHPLP
>Mature_50_residues
MNKSQDKEKKYFLEYLSLAPVLAVISISVAFSTWAIFNYIFPDLLFHPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAJL_NOSS1 (P58569)

Other databases:

- EMBL:   BA000019
- PIR:   AG2204
- RefSeq:   NP_487230.1
- ProteinModelPortal:   P58569
- SMR:   P58569
- STRING:   P58569
- GeneID:   1106788
- GenomeReviews:   BA000019_GR
- KEGG:   ana:asl3190
- NMPDR:   fig|103690.1.peg.3497
- HOGENOM:   HBG440152
- ProtClustDB:   CLSK2461620
- BioCyc:   NSP103690:ASL3190-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00522
- InterPro:   IPR002615

Pfam domain/function: PF01701 PSI_PsaJ

EC number: NA

Molecular weight: Translated: 5807; Mature: 5807

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c8f9fc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSQDKEKKYFLEYLSLAPVLAVISISVAFSTWAIFNYIFPDLLFHPLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MNKSQDKEKKYFLEYLSLAPVLAVISISVAFSTWAIFNYIFPDLLFHPLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840