| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230683
Identifier: 17230683
GI number: 17230683
Start: 3860358
End: 3860882
Strand: Reverse
Name: 17230683
Synonym: all3191
Alternate gene names: NA
Gene position: 3860882-3860358 (Counterclockwise)
Preceding gene: 17230684
Following gene: 17230682
Centisome position: 60.2
GC content: 41.52
Gene sequence:
>525_bases ATGGGGCTATTTGACCAAATTCTCGGCGCTGTTAGCAATCCCAATCAACAAGGCAGTTTAGGTCAACTGGGAAACATCAT TAACACTGTCAATCAACTAAGTAATCAAACTGGCACAAATCCTTCGACAATGCAATCTGTCGTGGGTGTAGTAGGTAACT ATGTACGTTCCGCTTTACAACAAAAGCAAGCCACAGAAGGTAATGAAGCAACCCAAGCATTAGTTAATGAATATGCCGGT ACCTCTTCTAATCCTCAGGCAGTTAATTCTCTATTTTCTCCTAACATACAACAACAGGTAGCACAGGTAGCATCCCAACA CACAGGTTTAGATGCTGGTACAATTCAGCAACTATTGCCAGTCATAGTACCTTTAGTATTGAATTTTTTGCAATCCGGCG CTAACGCTCAACATCCTCAAGGTGCTGGAAATTCTGTTTTAAATTCTTTCTTGGATGCAGATGGAGACGGTGATGTAGAT ATCGCTGATGCTATGCAGTTAATGAGCCGATATGTTGGTAGATAG
Upstream 100 bases:
>100_bases TTCATCCCTGAGTTTCTAGTATTGCGGAGTTAATTTATTCATAATAACAACAACAACACGTTCGCCTTTATGGCATGAAA AACAAGGGAGAAAAACAATT
Downstream 100 bases:
>100_bases TAAAATTAGTGGATTTGTCAGAGACAATTTATCAAGTAAATCTAAGTAGGGTTTTCTGAGTGTATAATAATACAAGTTTA TCCAAACTCTACTTAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGLFDQILGAVSNPNQQGSLGQLGNIINTVNQLSNQTGTNPSTMQSVVGVVGNYVRSALQQKQATEGNEATQALVNEYAG TSSNPQAVNSLFSPNIQQQVAQVASQHTGLDAGTIQQLLPVIVPLVLNFLQSGANAQHPQGAGNSVLNSFLDADGDGDVD IADAMQLMSRYVGR
Sequences:
>Translated_174_residues MGLFDQILGAVSNPNQQGSLGQLGNIINTVNQLSNQTGTNPSTMQSVVGVVGNYVRSALQQKQATEGNEATQALVNEYAG TSSNPQAVNSLFSPNIQQQVAQVASQHTGLDAGTIQQLLPVIVPLVLNFLQSGANAQHPQGAGNSVLNSFLDADGDGDVD IADAMQLMSRYVGR >Mature_173_residues GLFDQILGAVSNPNQQGSLGQLGNIINTVNQLSNQTGTNPSTMQSVVGVVGNYVRSALQQKQATEGNEATQALVNEYAGT SSNPQAVNSLFSPNIQQQVAQVASQHTGLDAGTIQQLLPVIVPLVLNFLQSGANAQHPQGAGNSVLNSFLDADGDGDVDI ADAMQLMSRYVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18148; Mature: 18017
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDQILGAVSNPNQQGSLGQLGNIINTVNQLSNQTGTNPSTMQSVVGVVGNYVRSALQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QKQATEGNEATQALVNEYAGTSSNPQAVNSLFSPNIQQQVAQVASQHTGLDAGTIQQLLP HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH VIVPLVLNFLQSGANAQHPQGAGNSVLNSFLDADGDGDVDIADAMQLMSRYVGR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure GLFDQILGAVSNPNQQGSLGQLGNIINTVNQLSNQTGTNPSTMQSVVGVVGNYVRSALQ CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QKQATEGNEATQALVNEYAGTSSNPQAVNSLFSPNIQQQVAQVASQHTGLDAGTIQQLLP HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH VIVPLVLNFLQSGANAQHPQGAGNSVLNSFLDADGDGDVDIADAMQLMSRYVGR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA