| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230637
Identifier: 17230637
GI number: 17230637
Start: 3807490
End: 3807858
Strand: Reverse
Name: 17230637
Synonym: all3145
Alternate gene names: NA
Gene position: 3807858-3807490 (Counterclockwise)
Preceding gene: 17230640
Following gene: 17230636
Centisome position: 59.37
GC content: 38.48
Gene sequence:
>369_bases GTGACAAAAATGATGGGAAATCAACAAATAACCTATCCACTAGCTCCACTCAGTCTGAACAAAGATGAACTAAGTATGAT TCGTAATCGCCGTGCTGTCAGGCGTTTACGCATGGAACAAAATTTTGCTTACTGGATATTTAGAACTGTGACAATTTCCT CTATCGTTGGTGCTGTATTGTTCGGTATAGGTGCCATAACTTGTTGGAAATTAGAGATGAATAGTCAACCAATTCCCACC ATCAATAACAGACAAGATTGGCAAACAAAAAAGCACGTATGTTTGGGTTGGATGCTCTTTGCTATTTCTAGTTTTCTTGC TAGTGCTTCATTAGCTAAAAAGTCTGATGGGTTGACAGCAGTTGAATAA
Upstream 100 bases:
>100_bases AACTTTTTATCTTGAAATTTATTTAATAAATTATCTCCGACGAAAGTTTATATATAACCACAGTTACGGATATCATATAT GACGTAGAAGGAGATATTAG
Downstream 100 bases:
>100_bases GTTTCATTAGCTAACTTAGGCAATAAGAGACTATTTATAAAATCAATCGGACTCACCCATGAAAACGAAAAATCAAGGGT GTAAGGGAGAGTTATTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTKMMGNQQITYPLAPLSLNKDELSMIRNRRAVRRLRMEQNFAYWIFRTVTISSIVGAVLFGIGAITCWKLEMNSQPIPT INNRQDWQTKKHVCLGWMLFAISSFLASASLAKKSDGLTAVE
Sequences:
>Translated_122_residues MTKMMGNQQITYPLAPLSLNKDELSMIRNRRAVRRLRMEQNFAYWIFRTVTISSIVGAVLFGIGAITCWKLEMNSQPIPT INNRQDWQTKKHVCLGWMLFAISSFLASASLAKKSDGLTAVE >Mature_121_residues TKMMGNQQITYPLAPLSLNKDELSMIRNRRAVRRLRMEQNFAYWIFRTVTISSIVGAVLFGIGAITCWKLEMNSQPIPTI NNRQDWQTKKHVCLGWMLFAISSFLASASLAKKSDGLTAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13869; Mature: 13737
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMMGNQQITYPLAPLSLNKDELSMIRNRRAVRRLRMEQNFAYWIFRTVTISSIVGAVL CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGIGAITCWKLEMNSQPIPTINNRQDWQTKKHVCLGWMLFAISSFLASASLAKKSDGLTA HHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VE CC >Mature Secondary Structure TKMMGNQQITYPLAPLSLNKDELSMIRNRRAVRRLRMEQNFAYWIFRTVTISSIVGAVL CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FGIGAITCWKLEMNSQPIPTINNRQDWQTKKHVCLGWMLFAISSFLASASLAKKSDGLTA HHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA