Click here to switch to the map view.

The map label for this gene is 17230599

Identifier: 17230599

GI number: 17230599

Start: 3759195

End: 3760412

Strand: Reverse

Name: 17230599

Synonym: all3107

Alternate gene names: NA

Gene position: 3760412-3759195 (Counterclockwise)

Preceding gene: 17230600

Following gene: 17230596

Centisome position: 58.63

GC content: 34.81

Gene sequence:

>1218_bases
ATGGTAGCGTCAAGAAGCGATTACAAACACTTAAGCGTAATGACAATGAAAACTCAGTACGGTGAAATGTACCAGTTACG
CTTAAGCAGTAAGTTAGGGAGAAAAACTATTGGATTAGGAGGGGATAAGCTTACAGCCTTAAACCTAGCCGTGATGGTAG
ATGAGGAGATAAGCCGATTAATCGCGCTAGGGGAACTGATAGAAATAGATTCACTCAAAGATATGGTCAAGAGTGAACAA
GCAAAGTTTAAGGCTAAGAAGACAGGAAGCGTCAGGTTAGTAGAGAAAGATGACTTAATTGTGTTATGGGATAACTATGT
TAAATTTCATGTAGCATTGGGTACTTGGACAGAAACATATATAACAAGTCACATTGCACTAATAAGACGATTATTAAACA
GTTGTCCTTTTCATAAATTAGAAGATAAACAACAGTTAATAGAGTGGATATTTAACAATACTAGCCGAACAAAGAAAACC
AGTAAGTCTCGATTTATGTTGATAGTAGCCGCTATTGACTGGAATAGTAAACAAGGGAATATCCCGCGTAAGTGGGGGAT
TGAATACCGGGATGCTCTCGAAAGCATTAACATTAAAACTGAAAAAAAATGTAGCGTAGTAAATGAAGAAGACGACATTG
ATATTTTTTCAGTTGATGAAGTTTATAGAATCCTAGAAGCTTTGAAAAATGAAACTTACAGCCGCAGGCAAGGTAGGCAT
TATCAATATTACAAATATGTTTACTTTTGCTGGTTAACAGGATGTAGACCATCAGAGGCAATTGCTTTGAAGTGGGAGAA
TGTAGACTTGCAGAAAAAGCGGATTAAATTTTGTGAAGCAGAAATGAATAGAGGAGGACTAATAATTAAAAAACAAGGTA
CTAAAACGGTATCACATAGATACTTTCCTATTAATCCTGAGCTAATGGAGCTATTAAACGATATTCCACATAGAAAAGGA
TATGTTTTTAAAAATATCCAAGGTAAACCAATAAACCATAATGTATTTTATAGAGTGTGGAAGTTGCTATTAGAGAATAT
GGGTATCAAATATCGTGTACCCTACCAACTAAGGCACACAATGATTAGTTATCACGCTAATAATGATTACCCGATACATA
AGTTAGCTGAGTTAGTTGGTAACAGCGAACAAATAATTAAAGAACACTATCTCAAGTTAGATATTGAGAGAATTAATTTA
CCAGATGTAATCAAATAA

Upstream 100 bases:

>100_bases
TTTACAGTATTTAGTGATAACAAATATAAGCTAACTTCAACCAATTATTCAACCAATTGAATTAAAATGCTATCAGTTCA
TCTACCCTGAGAGGTAAAAA

Downstream 100 bases:

>100_bases
CTAATAACACATCAATAATTTATAAACCTCCTAGTTTAATTTATAGGAGGTATTTTTTCGCTTGTATTGATTAGCTAGAA
AATAACGTTATTAGCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVASRSDYKHLSVMTMKTQYGEMYQLRLSSKLGRKTIGLGGDKLTALNLAVMVDEEISRLIALGELIEIDSLKDMVKSEQ
AKFKAKKTGSVRLVEKDDLIVLWDNYVKFHVALGTWTETYITSHIALIRRLLNSCPFHKLEDKQQLIEWIFNNTSRTKKT
SKSRFMLIVAAIDWNSKQGNIPRKWGIEYRDALESINIKTEKKCSVVNEEDDIDIFSVDEVYRILEALKNETYSRRQGRH
YQYYKYVYFCWLTGCRPSEAIALKWENVDLQKKRIKFCEAEMNRGGLIIKKQGTKTVSHRYFPINPELMELLNDIPHRKG
YVFKNIQGKPINHNVFYRVWKLLLENMGIKYRVPYQLRHTMISYHANNDYPIHKLAELVGNSEQIIKEHYLKLDIERINL
PDVIK

Sequences:

>Translated_405_residues
MVASRSDYKHLSVMTMKTQYGEMYQLRLSSKLGRKTIGLGGDKLTALNLAVMVDEEISRLIALGELIEIDSLKDMVKSEQ
AKFKAKKTGSVRLVEKDDLIVLWDNYVKFHVALGTWTETYITSHIALIRRLLNSCPFHKLEDKQQLIEWIFNNTSRTKKT
SKSRFMLIVAAIDWNSKQGNIPRKWGIEYRDALESINIKTEKKCSVVNEEDDIDIFSVDEVYRILEALKNETYSRRQGRH
YQYYKYVYFCWLTGCRPSEAIALKWENVDLQKKRIKFCEAEMNRGGLIIKKQGTKTVSHRYFPINPELMELLNDIPHRKG
YVFKNIQGKPINHNVFYRVWKLLLENMGIKYRVPYQLRHTMISYHANNDYPIHKLAELVGNSEQIIKEHYLKLDIERINL
PDVIK
>Mature_405_residues
MVASRSDYKHLSVMTMKTQYGEMYQLRLSSKLGRKTIGLGGDKLTALNLAVMVDEEISRLIALGELIEIDSLKDMVKSEQ
AKFKAKKTGSVRLVEKDDLIVLWDNYVKFHVALGTWTETYITSHIALIRRLLNSCPFHKLEDKQQLIEWIFNNTSRTKKT
SKSRFMLIVAAIDWNSKQGNIPRKWGIEYRDALESINIKTEKKCSVVNEEDDIDIFSVDEVYRILEALKNETYSRRQGRH
YQYYKYVYFCWLTGCRPSEAIALKWENVDLQKKRIKFCEAEMNRGGLIIKKQGTKTVSHRYFPINPELMELLNDIPHRKG
YVFKNIQGKPINHNVFYRVWKLLLENMGIKYRVPYQLRHTMISYHANNDYPIHKLAELVGNSEQIIKEHYLKLDIERINL
PDVIK

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47563; Mature: 47563

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50075 ACP_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASRSDYKHLSVMTMKTQYGEMYQLRLSSKLGRKTIGLGGDKLTALNLAVMVDEEISRL
CCCCCCCCCEEEEEEEECCCCCCEEEHHHHHCCCCEECCCCCCEEEEEEEEEEHHHHHHH
IALGELIEIDSLKDMVKSEQAKFKAKKTGSVRLVEKDDLIVLWDNYVKFHVALGTWTETY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCEEEEEEEECCHHHHH
ITSHIALIRRLLNSCPFHKLEDKQQLIEWIFNNTSRTKKTSKSRFMLIVAAIDWNSKQGN
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEEEEECCCCCCC
IPRKWGIEYRDALESINIKTEKKCSVVNEEDDIDIFSVDEVYRILEALKNETYSRRQGRH
CCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHCCCC
YQYYKYVYFCWLTGCRPSEAIALKWENVDLQKKRIKFCEAEMNRGGLIIKKQGTKTVSHR
CHHHEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
YFPINPELMELLNDIPHRKGYVFKNIQGKPINHNVFYRVWKLLLENMGIKYRVPYQLRHT
CCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHH
MISYHANNDYPIHKLAELVGNSEQIIKEHYLKLDIERINLPDVIK
EEEEECCCCCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCCC
>Mature Secondary Structure
MVASRSDYKHLSVMTMKTQYGEMYQLRLSSKLGRKTIGLGGDKLTALNLAVMVDEEISRL
CCCCCCCCCEEEEEEEECCCCCCEEEHHHHHCCCCEECCCCCCEEEEEEEEEEHHHHHHH
IALGELIEIDSLKDMVKSEQAKFKAKKTGSVRLVEKDDLIVLWDNYVKFHVALGTWTETY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCEEEEEEEECCHHHHH
ITSHIALIRRLLNSCPFHKLEDKQQLIEWIFNNTSRTKKTSKSRFMLIVAAIDWNSKQGN
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEEEEECCCCCCC
IPRKWGIEYRDALESINIKTEKKCSVVNEEDDIDIFSVDEVYRILEALKNETYSRRQGRH
CCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHCCCC
YQYYKYVYFCWLTGCRPSEAIALKWENVDLQKKRIKFCEAEMNRGGLIIKKQGTKTVSHR
CHHHEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
YFPINPELMELLNDIPHRKGYVFKNIQGKPINHNVFYRVWKLLLENMGIKYRVPYQLRHT
CCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHH
MISYHANNDYPIHKLAELVGNSEQIIKEHYLKLDIERINLPDVIK
EEEEECCCCCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA