| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230600
Identifier: 17230600
GI number: 17230600
Start: 3760608
End: 3760988
Strand: Reverse
Name: 17230600
Synonym: all3108
Alternate gene names: NA
Gene position: 3760988-3760608 (Counterclockwise)
Preceding gene: 17230602
Following gene: 17230599
Centisome position: 58.64
GC content: 44.09
Gene sequence:
>381_bases ATGTTTAGTCGTGCTGAATTAGAACTGTTGACTATCCCCCAATTAAATCTACTGGTGAAACGGTATGGCTTAAAACCAAC GGGAACAGGAGGACAGAAGGCTAGCTATATCACTACCTTAATGGCGTTCCCGGCTTTAGCACTCCAACAATTAGAGGATG GAAAGGGGCTAAAACCTCCTACATTCTTTGGTCTTGAGACAATGGGACAAATCCTAGACGAGATGGCAACACCTACCTGT GAACAATCAGCGTTACTCCGACTGAGTTTTGAAGGTAGGCGGATGGATTACCCCAATAGATACCAGCAAGAGAGACTACT GGCGCTGTACAAGGCTAAGAATCATCTAACTGAGGTGATTGACTTATTGAGAATGATGTAA
Upstream 100 bases:
>100_bases TCAGTTGCGCGCATCTGTTTCAATTTTTAGTCAGTGGGTATCTACCCTGAGAAAGTTGTTACCCACTGATACCACTTTTA CAAATGGATGAATCTATTTT
Downstream 100 bases:
>100_bases AAAAGACGGAGGGGGGATTTGAACCCCCGTTAGGTTTCTATAAAACGCATTTTGAGTGCGTCCACTAAGCAAGCTATAAA TGTTGATATACAATATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFSRAELELLTIPQLNLLVKRYGLKPTGTGGQKASYITTLMAFPALALQQLEDGKGLKPPTFFGLETMGQILDEMATPTC EQSALLRLSFEGRRMDYPNRYQQERLLALYKAKNHLTEVIDLLRMM
Sequences:
>Translated_126_residues MFSRAELELLTIPQLNLLVKRYGLKPTGTGGQKASYITTLMAFPALALQQLEDGKGLKPPTFFGLETMGQILDEMATPTC EQSALLRLSFEGRRMDYPNRYQQERLLALYKAKNHLTEVIDLLRMM >Mature_126_residues MFSRAELELLTIPQLNLLVKRYGLKPTGTGGQKASYITTLMAFPALALQQLEDGKGLKPPTFFGLETMGQILDEMATPTC EQSALLRLSFEGRRMDYPNRYQQERLLALYKAKNHLTEVIDLLRMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14311; Mature: 14311
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRAELELLTIPQLNLLVKRYGLKPTGTGGQKASYITTLMAFPALALQQLEDGKGLKPP CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC TFFGLETMGQILDEMATPTCEQSALLRLSFEGRRMDYPNRYQQERLLALYKAKNHLTEVI CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLLRMM HHHHCC >Mature Secondary Structure MFSRAELELLTIPQLNLLVKRYGLKPTGTGGQKASYITTLMAFPALALQQLEDGKGLKPP CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC TFFGLETMGQILDEMATPTCEQSALLRLSFEGRRMDYPNRYQQERLLALYKAKNHLTEVI CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLLRMM HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA