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The map label for this gene is 17230518

Identifier: 17230518

GI number: 17230518

Start: 3666133

End: 3666687

Strand: Direct

Name: 17230518

Synonym: alr3026

Alternate gene names: NA

Gene position: 3666133-3666687 (Clockwise)

Preceding gene: 17230512

Following gene: 17230519

Centisome position: 57.16

GC content: 40.72

Gene sequence:

>555_bases
TTGGAAAAATTGTTGAAAATATCGAGAATAATTGATGCCTTTACAGAACGCATAGGTCGATATACCAGTTGGTTGGTGTT
AGTCATGGTCATACTAGGCGTGTGGAATGTTGTCGGGCGATATTTAGGCCGCATTAGCGGTAACAACCTCACATCCAACG
CTTATATAGAAGCTCAATGGTATATTTTTGATGTAATTTTCTTCTTAGGGGCTGCTTATACCCTGAAGCATAATGAACAC
GTCCGCGTTGATATTTTTTATAGTAATTGGCAACGTCGGCGTAAAGCGATCGCCGACTTTCTCGGAACCATATTTTTTCT
CATTCCTTTCAGCATCATAGTGATTTTTGTTTCTTGGGAAACCATTGTCGCATCATGGCAGATTGGTGAATTATCACCCG
ATCCAGGTGGGTTGCCCCGCTACCCCATTAAAGCCATGATTATCGTTGGCTTTGTGTTGTTAATTATTCAAGGAATTTCC
CAAGCAATTAAAAATTTAGCAATTATCCAAGGCAGACTAGAACCCCAGGAGGAAAATCATGACACTGGCTTATGA

Upstream 100 bases:

>100_bases
CTCATCTGTCCACATAGCAAATTCTCACAAAATTAGCAGATTTACCTCTCCTATTGCGCTGTAAACTACTTTTACAGGAG
TTTAATAGGTAAAAGCAGCC

Downstream 100 bases:

>100_bases
ATGGTTGGGGCCAGTGATGTTTGCTGGTGCTTTAGTTCTATTATCTTCAGGCTACCCAGTAGCTTTTTCTTTGGGTGGAG
TAGCGATTTTATTTGGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP Transporter DctQ Family Protein; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; C4-Dicarboxylate Transporter Permease; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; Small Integral Membrane Tranport Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap-T Family Transporter Dctq Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Mannitol Transporter; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEKLLKISRIIDAFTERIGRYTSWLVLVMVILGVWNVVGRYLGRISGNNLTSNAYIEAQWYIFDVIFFLGAAYTLKHNEH
VRVDIFYSNWQRRRKAIADFLGTIFFLIPFSIIVIFVSWETIVASWQIGELSPDPGGLPRYPIKAMIIVGFVLLIIQGIS
QAIKNLAIIQGRLEPQEENHDTGL

Sequences:

>Translated_184_residues
MEKLLKISRIIDAFTERIGRYTSWLVLVMVILGVWNVVGRYLGRISGNNLTSNAYIEAQWYIFDVIFFLGAAYTLKHNEH
VRVDIFYSNWQRRRKAIADFLGTIFFLIPFSIIVIFVSWETIVASWQIGELSPDPGGLPRYPIKAMIIVGFVLLIIQGIS
QAIKNLAIIQGRLEPQEENHDTGL
>Mature_184_residues
MEKLLKISRIIDAFTERIGRYTSWLVLVMVILGVWNVVGRYLGRISGNNLTSNAYIEAQWYIFDVIFFLGAAYTLKHNEH
VRVDIFYSNWQRRRKAIADFLGTIFFLIPFSIIVIFVSWETIVASWQIGELSPDPGGLPRYPIKAMIIVGFVLLIIQGIS
QAIKNLAIIQGRLEPQEENHDTGL

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21073; Mature: 21073

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLLKISRIIDAFTERIGRYTSWLVLVMVILGVWNVVGRYLGRISGNNLTSNAYIEAQW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
YIFDVIFFLGAAYTLKHNEHVRVDIFYSNWQRRRKAIADFLGTIFFLIPFSIIVIFVSWE
HHHHHHHHHCCHHEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVASWQIGELSPDPGGLPRYPIKAMIIVGFVLLIIQGISQAIKNLAIIQGRLEPQEENH
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DTGL
CCCC
>Mature Secondary Structure
MEKLLKISRIIDAFTERIGRYTSWLVLVMVILGVWNVVGRYLGRISGNNLTSNAYIEAQW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
YIFDVIFFLGAAYTLKHNEHVRVDIFYSNWQRRRKAIADFLGTIFFLIPFSIIVIFVSWE
HHHHHHHHHCCHHEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVASWQIGELSPDPGGLPRYPIKAMIIVGFVLLIIQGISQAIKNLAIIQGRLEPQEENH
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DTGL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA