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The map label for this gene is 17230510

Identifier: 17230510

GI number: 17230510

Start: 3660111

End: 3660794

Strand: Direct

Name: 17230510

Synonym: alr3018

Alternate gene names: NA

Gene position: 3660111-3660794 (Clockwise)

Preceding gene: 17230509

Following gene: 17230511

Centisome position: 57.07

GC content: 44.01

Gene sequence:

>684_bases
ATGAGTAGCGAAATCCAACTCAGCCTCTTTAACGAAGAATCAAACTTTAACCAACAAGATTTGATTCCCAAGGATGCCAA
AATTCCCATTCCACCCGGAACGTATACCAATATGACCGAGTTGGCACAGCATTGTAATCAGTGCCAGCGTTGTGAATTGG
GTAGCACCCGTACCCATGCTGTGGTCGGCAGAGGTAACCTCAAAGCACCTATTATGGTCGTTGGAGAAGCACCTGGTCAA
AATGAAGACGAAACAGGCCTGCCTTTTGTCGGTAGATCAGGGCAGTTGCTAGATAAAATCTTAGCATCAGTGGATTTGAC
TACTGAGCATGATGTTTATATTGCTAACATTAATAAGTGCCGACCACCTGATAATCGAGTTCCTACCCCTAATGAAATGG
CGGCTTGTTTACCATATTTATTAGAACAAATACGCCTTGTTAACCCCAAAATCATTTTGCTCACAGGTGCAACCGCCGTC
AAAGGACTTACTGGTGATAAACGCGGCATTACAAAGATTCGCGGCCAGTGGATAGAGTGGGCAGGACATTTATGTATGCC
CATTTTCCACCCCTCTTATTTATTGCGTAACCCTTCTAAGGAGCAAGGTAGTCCTAAATGGTTAATGTGGCAAGATATAC
GAGCAGTACGCACTAAGTACGATGAAATACGGGAAAGCAATTGA

Upstream 100 bases:

>100_bases
GTGTTCAGTAACAGTACCTGTCTGAGAGATATCTTACAAAAGTTATAGCCCATTAGATTCACACAAATTAGCTGTCACTA
GGCCAATTATCCAGATTTTC

Downstream 100 bases:

>100_bases
ATTAAAAAGCTTTCTTCGTATTCGGCTAATTGCTGACGATATGGTTACTTTGCTGGGTAATAGGTAATTGTTTTTTACTA
TTATTTATGGCGCTACGCGT

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSSEIQLSLFNEESNFNQQDLIPKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQ
NEDETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLEQIRLVNPKIILLTGATAV
KGLTGDKRGITKIRGQWIEWAGHLCMPIFHPSYLLRNPSKEQGSPKWLMWQDIRAVRTKYDEIRESN

Sequences:

>Translated_227_residues
MSSEIQLSLFNEESNFNQQDLIPKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQ
NEDETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLEQIRLVNPKIILLTGATAV
KGLTGDKRGITKIRGQWIEWAGHLCMPIFHPSYLLRNPSKEQGSPKWLMWQDIRAVRTKYDEIRESN
>Mature_226_residues
SSEIQLSLFNEESNFNQQDLIPKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHAVVGRGNLKAPIMVVGEAPGQN
EDETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKCRPPDNRVPTPNEMAACLPYLLEQIRLVNPKIILLTGATAVK
GLTGDKRGITKIRGQWIEWAGHLCMPIFHPSYLLRNPSKEQGSPKWLMWQDIRAVRTKYDEIRESN

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 25416; Mature: 25284

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEIQLSLFNEESNFNQQDLIPKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHA
CCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
VVGRGNLKAPIMVVGEAPGQNEDETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKC
EEECCCCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEECCCC
RPPDNRVPTPNEMAACLPYLLEQIRLVNPKIILLTGATAVKGLTGDKRGITKIRGQWIEW
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHH
AGHLCMPIFHPSYLLRNPSKEQGSPKWLMWQDIRAVRTKYDEIRESN
HCCHHHHHHCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSEIQLSLFNEESNFNQQDLIPKDAKIPIPPGTYTNMTELAQHCNQCQRCELGSTRTHA
CCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
VVGRGNLKAPIMVVGEAPGQNEDETGLPFVGRSGQLLDKILASVDLTTEHDVYIANINKC
EEECCCCCCCEEEEECCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCEEEEECCCC
RPPDNRVPTPNEMAACLPYLLEQIRLVNPKIILLTGATAVKGLTGDKRGITKIRGQWIEW
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHH
AGHLCMPIFHPSYLLRNPSKEQGSPKWLMWQDIRAVRTKYDEIRESN
HCCHHHHHHCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA