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The map label for this gene is 17230509

Identifier: 17230509

GI number: 17230509

Start: 3658917

End: 3659939

Strand: Direct

Name: 17230509

Synonym: alr3017

Alternate gene names: NA

Gene position: 3658917-3659939 (Clockwise)

Preceding gene: 17230507

Following gene: 17230510

Centisome position: 57.05

GC content: 40.76

Gene sequence:

>1023_bases
GTGAGGCGCAACACAATTACTCACGAATTTGACCAAGGTGAGCCGAAAGAATCATTGGTTCCTCCAGAAAACGACAATCG
CTCATCAGAGGCATCCCAGTTACTGCGGCAAGGAATTCAACAACAGCAGGCTGGAGACTTAATAACAGCCATCAAGTCCT
TACAGCAATCCCTAGAGATGTTTCAGCTAGCCAGGGATGTCAAACAACAAGAACAAGTCCTATCGTTGCTGGCATTAATC
ACTTACACTTCAGGAGATTATAGAAATGTTATTGCTTATTGCCAAAAGTGTTTATCCTTGACAGATAACCCGGATTTATC
AGTAAGGATGCAAATACTGTCTCATTTGGGTAATGCTTACCGTCATCTGAACGACTATAACAAAGCCATTGAGTTTCTCC
AAGCGTGTTTGCAACTAACTCAAACATTGCAAGACAAACGGAGTCAAGTTGCAGCCTTAAATAATTTGGGATTAGTATAT
AAAGCCTCTGGTAATTTTAATCAAGCAATTGGGTATCAAGAACAAAGCCTCATCATTGTTGAAGAACTCAAAGATAGCTG
GGGCATAGAACAAGTGCTGAAAAATCTAGGCAATACTTGGTATGCTTTGGATAATTACCCAAAAGCGATCGCCTACTACG
AAAAATGCGTCAAAATAGCACTCTCCTTAAATAATCCTCGTAGTGCTGCTCAAGTATTGAAAAACTTGGGTAATGCTTGC
TATGCGATCGGCGATTATGCTAAAGCCATTAAATACTATGAAAAACGCTGGCAATTAGCTAGAGACCTCAAAGATAAGCG
TAGTGAAGAACAGTCTCTTGGTAGTTTAGGTGTTACCTGTGAAGCTTTAGGTGACCATAGCAGAGCTATTACATACTATG
AAGCACGCCTATTGTTAGCCAGAAGCATCAAAGACAAACGCATTGAAGAACAAGCTCTTGCCAGTCTGAAAATAGCTTGT
TATGCCTTAGGGGATTATGCCAAAGCCATGCAATATGAACAAGGAACATCCACCAGTACCTAA

Upstream 100 bases:

>100_bases
CGTCACCCCAGTTATCAGGAATTGGTCAATGTCAAACGGTGAAGGGAACAACAGCATCAACAATAAGGTTCCTGTACAAG
TTGCCAAATACCCCAAACAA

Downstream 100 bases:

>100_bases
ACTACATACAATTCATTTAGCCGCATCATCCCTAGAATTCACTGATACAATAAGAATCTAGTCAATGTTCAGTGTTCAGT
AACAGTACCTGTCTGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; Diguanylate Cyclase/Serine/Threonine Protein Kinase; Tetratricopeptide Repeat-Containing Protein; SARP Family Transcriptional Regulator; Histidine Kinase; NB-ARC Domain-Containing Protein; TPR Domain-Containing Protein; Protein Containing Tetratricopeptide Repeat; Tetratricopeptide Protein; Protein Serine/Threonine Phosphatase; TPR Domain Family Protein; Tetratricopeptide TPR2 Protein; Tetratricopeptide Domain-Containing Protein; XRE Family Transcriptional Regulator With TPR Repeat Domain; Metal Dependent Phosphohydrolase; Regulatory Protein AfsR; Transcriptional Regulator XRE Family; Fis Family Transcriptional Regulator; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRRNTITHEFDQGEPKESLVPPENDNRSSEASQLLRQGIQQQQAGDLITAIKSLQQSLEMFQLARDVKQQEQVLSLLALI
TYTSGDYRNVIAYCQKCLSLTDNPDLSVRMQILSHLGNAYRHLNDYNKAIEFLQACLQLTQTLQDKRSQVAALNNLGLVY
KASGNFNQAIGYQEQSLIIVEELKDSWGIEQVLKNLGNTWYALDNYPKAIAYYEKCVKIALSLNNPRSAAQVLKNLGNAC
YAIGDYAKAIKYYEKRWQLARDLKDKRSEEQSLGSLGVTCEALGDHSRAITYYEARLLLARSIKDKRIEEQALASLKIAC
YALGDYAKAMQYEQGTSTST

Sequences:

>Translated_340_residues
MRRNTITHEFDQGEPKESLVPPENDNRSSEASQLLRQGIQQQQAGDLITAIKSLQQSLEMFQLARDVKQQEQVLSLLALI
TYTSGDYRNVIAYCQKCLSLTDNPDLSVRMQILSHLGNAYRHLNDYNKAIEFLQACLQLTQTLQDKRSQVAALNNLGLVY
KASGNFNQAIGYQEQSLIIVEELKDSWGIEQVLKNLGNTWYALDNYPKAIAYYEKCVKIALSLNNPRSAAQVLKNLGNAC
YAIGDYAKAIKYYEKRWQLARDLKDKRSEEQSLGSLGVTCEALGDHSRAITYYEARLLLARSIKDKRIEEQALASLKIAC
YALGDYAKAMQYEQGTSTST
>Mature_340_residues
MRRNTITHEFDQGEPKESLVPPENDNRSSEASQLLRQGIQQQQAGDLITAIKSLQQSLEMFQLARDVKQQEQVLSLLALI
TYTSGDYRNVIAYCQKCLSLTDNPDLSVRMQILSHLGNAYRHLNDYNKAIEFLQACLQLTQTLQDKRSQVAALNNLGLVY
KASGNFNQAIGYQEQSLIIVEELKDSWGIEQVLKNLGNTWYALDNYPKAIAYYEKCVKIALSLNNPRSAAQVLKNLGNAC
YAIGDYAKAIKYYEKRWQLARDLKDKRSEEQSLGSLGVTCEALGDHSRAITYYEARLLLARSIKDKRIEEQALASLKIAC
YALGDYAKAMQYEQGTSTST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=329, Percent_Identity=28.2674772036474, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI164519122, Length=323, Percent_Identity=28.7925696594427, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI224548927, Length=312, Percent_Identity=27.5641025641026, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI224548925, Length=312, Percent_Identity=27.5641025641026, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25147165, Length=271, Percent_Identity=25.830258302583, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25147167, Length=178, Percent_Identity=24.1573033707865, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650658, Length=259, Percent_Identity=28.1853281853282, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24660950, Length=222, Percent_Identity=27.027027027027, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38373; Mature: 38373

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNTITHEFDQGEPKESLVPPENDNRSSEASQLLRQGIQQQQAGDLITAIKSLQQSLEM
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQLARDVKQQEQVLSLLALITYTSGDYRNVIAYCQKCLSLTDNPDLSVRMQILSHLGNAY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RHLNDYNKAIEFLQACLQLTQTLQDKRSQVAALNNLGLVYKASGNFNQAIGYQEQSLIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCHHH
EELKDSWGIEQVLKNLGNTWYALDNYPKAIAYYEKCVKIALSLNNPRSAAQVLKNLGNAC
HHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YAIGDYAKAIKYYEKRWQLARDLKDKRSEEQSLGSLGVTCEALGDHSRAITYYEARLLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHH
RSIKDKRIEEQALASLKIACYALGDYAKAMQYEQGTSTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRNTITHEFDQGEPKESLVPPENDNRSSEASQLLRQGIQQQQAGDLITAIKSLQQSLEM
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQLARDVKQQEQVLSLLALITYTSGDYRNVIAYCQKCLSLTDNPDLSVRMQILSHLGNAY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RHLNDYNKAIEFLQACLQLTQTLQDKRSQVAALNNLGLVYKASGNFNQAIGYQEQSLIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCHHH
EELKDSWGIEQVLKNLGNTWYALDNYPKAIAYYEKCVKIALSLNNPRSAAQVLKNLGNAC
HHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YAIGDYAKAIKYYEKRWQLARDLKDKRSEEQSLGSLGVTCEALGDHSRAITYYEARLLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHH
RSIKDKRIEEQALASLKIACYALGDYAKAMQYEQGTSTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA