| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230505
Identifier: 17230505
GI number: 17230505
Start: 3656204
End: 3656947
Strand: Reverse
Name: 17230505
Synonym: all3013
Alternate gene names: NA
Gene position: 3656947-3656204 (Counterclockwise)
Preceding gene: 17230506
Following gene: 17230503
Centisome position: 57.02
GC content: 45.7
Gene sequence:
>744_bases ATGGCTATGTCTTCTACACTACAACGGGCATTTACCAACGGCCGTGTACTGAAAGTAATTAGTGGTTTGAACAACTTTGA CGCTGATAGCGTCGCAGCTATTATTAAAGCTGCTGAACTTGGTGGTGCAACTTTTGTGGATATCGCCGCCGATGCTGGAT TGGTTCAGTTAGCTAAAAAATTGATTAATTTACCAGTTTGTGTATCAGCAGTAGATCCAGAAAAATTTGTCACAGCCGTA GAAGCTGGTGCAGATTTGATTGAAATCGGTAATTTTGATACTTTTTATGCTCAAGGACGCAGATTTGAGGCTGCGGAAGT ATTAGCGCTGACTAAACAAACCCGCGCGCTCTTACCCGAAATTACCCTATCTGTGACTGTTCCTCACATCCTAGAACTAG ATCAACAGGTACAGCTAGCCGAAGAATTGGTAAAAGCTGGAGCAGATATCATCCAAACCGAAGGCGGTACAAGCAGCCAG CCGACTCATCCTGGAAGCCTGGGATTAATTGAAAAAGCTGCTCCCACTTTGGCAGCAGCTTATGAAATTTCTCGTGCTGT ATCAGTACCAGTATTGTGTGCTTCGGGTATTTCTAATGTTACTGCACCTCTGGCGATCGCCTCCGGTGCGGCTGGTGTTG GTGTCGGTTCTGCTATCAACCAACTCAATAGCGAAGTAGCTATGATTGCTGCGGTGCGCGGCTTAGTGGAAGCTTTGAAA ACCTTTGAGCGTGCAATTGTCTAG
Upstream 100 bases:
>100_bases ATTGCAAGTATTTTCTACTCTTTTTTTAAATGAATTAGTTCTGTCTTTATCTGAGGGGCGGTAGAATAAACCTAATTTTC GTAGCTTCAACAGAATAACT
Downstream 100 bases:
>100_bases TTAACGCCGTGTGCAACTTTCTCCCAGACCTAACCCCCAACCCCTTCCCTTGTAGGGAAGGGGAGTAATAATTAAAGCCT CTACGCCACTTGCTACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAV EAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQ PTHPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK TFERAIV
Sequences:
>Translated_247_residues MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAV EAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQ PTHPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK TFERAIV >Mature_246_residues AMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKKLINLPVCVSAVDPEKFVTAVE AGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPEITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQP THPGSLGLIEKAAPTLAAAYEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALKT FERAIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25406; Mature: 25274
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKK CCCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHH LINLPVCVSAVDPEKFVTAVEAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPE HHCCCEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH ITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQPTHPGSLGLIEKAAPTLAAA HHHEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH YEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TFERAIV HHHHHCC >Mature Secondary Structure AMSSTLQRAFTNGRVLKVISGLNNFDADSVAAIIKAAELGGATFVDIAADAGLVQLAKK CCHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHH LINLPVCVSAVDPEKFVTAVEAGADLIEIGNFDTFYAQGRRFEAAEVLALTKQTRALLPE HHCCCEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH ITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSQPTHPGSLGLIEKAAPTLAAA HHHEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH YEISRAVSVPVLCASGISNVTAPLAIASGAAGVGVGSAINQLNSEVAMIAAVRGLVEALK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TFERAIV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA