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The map label for this gene is ybbM [C]

Identifier: 17230503

GI number: 17230503

Start: 3653702

End: 3654478

Strand: Reverse

Name: ybbM [C]

Synonym: all3011

Alternate gene names: 17230503

Gene position: 3654478-3653702 (Counterclockwise)

Preceding gene: 17230505

Following gene: 17230502

Centisome position: 56.98

GC content: 46.59

Gene sequence:

>777_bases
ATGCAGGGTTTGATTAGTTTGGATTTGGTGGATTTGGTGATGGCGGTAGGATTGATGGCGATCGCTATTGGGTTGTCTGC
TTGGGAAGGATTGGGGCTAGAGTTGAATTTAGCGATCGCTACTGGCAGAACTATCCTACAGTTATTGGTTTTGGGGTATG
TTTTAGACTTCATCTTTGCTCTGGACAATCCTTGGGCAGTTTTGGCGATTTTAGGGGTGATACTGACGATTACGGCGATT
GTCGCACGAAATCGCATCAGTCAGAAAATTCCTTATGTATTGCCTTTGGTATGGGGAGCAATTTTCATAAGTACTACCCT
GACGGTGTTTTACACCACCTTCTTAATCATTCAACCAGATAGATGGTATGAACCGCGCTATGTAATTCCCCTGGCGGGGA
TGGTGTTGGGTAATGCGATGAATGCGGCGGCGATCGCTGGGGAACGGCTTGTCAGTTCGATGAACTCTTTTCCCACGGAA
ATCGAAACTCATTTGAGCTTAGGCGCAACTCCAGCACAAGCTGTCAGCCAGTACCGTAAGGAAGCCATCAGAGCCGCATT
ACTCCCCACCTTGAATCAAATGATGCTTGTCGGGATGGTAGCTATCCCCGGAATCACCACCGGACAGTTACTTGCTGGGA
TTAATGCTCTGGATGCGGTATCTTATGAGATTGTGATTATCTTTATGGTTGCGATCGCCAACCTGTTAACAACTGTTTTA
CTAACTAAAGGATTGTGTCGGCAGTTTTTTAATTCTGCGGCGCAGTTGGTAAGGTGA

Upstream 100 bases:

>100_bases
AGTCCATAGTGCAAAACCTTCATTTTTAGCGTTTAACTGTTGACTGTTGACTGTTGACCGTTGACTATTGACTGTTGACT
AATTAGGGAGTGGAGAAGAG

Downstream 100 bases:

>100_bases
GTAGAATTAGGGGTGTAAGGGTTTAGGGGTGTGGGGGTGTGGGGGTGTGGGGGTGTGGGGGTGTAGATAATCTACGGACT
GGCTCGGATATCGATAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MQGLISLDLVDLVMAVGLMAIAIGLSAWEGLGLELNLAIATGRTILQLLVLGYVLDFIFALDNPWAVLAILGVILTITAI
VARNRISQKIPYVLPLVWGAIFISTTLTVFYTTFLIIQPDRWYEPRYVIPLAGMVLGNAMNAAAIAGERLVSSMNSFPTE
IETHLSLGATPAQAVSQYRKEAIRAALLPTLNQMMLVGMVAIPGITTGQLLAGINALDAVSYEIVIIFMVAIANLLTTVL
LTKGLCRQFFNSAAQLVR

Sequences:

>Translated_258_residues
MQGLISLDLVDLVMAVGLMAIAIGLSAWEGLGLELNLAIATGRTILQLLVLGYVLDFIFALDNPWAVLAILGVILTITAI
VARNRISQKIPYVLPLVWGAIFISTTLTVFYTTFLIIQPDRWYEPRYVIPLAGMVLGNAMNAAAIAGERLVSSMNSFPTE
IETHLSLGATPAQAVSQYRKEAIRAALLPTLNQMMLVGMVAIPGITTGQLLAGINALDAVSYEIVIIFMVAIANLLTTVL
LTKGLCRQFFNSAAQLVR
>Mature_258_residues
MQGLISLDLVDLVMAVGLMAIAIGLSAWEGLGLELNLAIATGRTILQLLVLGYVLDFIFALDNPWAVLAILGVILTITAI
VARNRISQKIPYVLPLVWGAIFISTTLTVFYTTFLIIQPDRWYEPRYVIPLAGMVLGNAMNAAAIAGERLVSSMNSFPTE
IETHLSLGATPAQAVSQYRKEAIRAALLPTLNQMMLVGMVAIPGITTGQLLAGINALDAVSYEIVIIFMVAIANLLTTVL
LTKGLCRQFFNSAAQLVR

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=252, Percent_Identity=36.5079365079365, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27801; Mature: 27801

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLISLDLVDLVMAVGLMAIAIGLSAWEGLGLELNLAIATGRTILQLLVLGYVLDFIFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LDNPWAVLAILGVILTITAIVARNRISQKIPYVLPLVWGAIFISTTLTVFYTTFLIIQPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC
RWYEPRYVIPLAGMVLGNAMNAAAIAGERLVSSMNSFPTEIETHLSLGATPAQAVSQYRK
CCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
EAIRAALLPTLNQMMLVGMVAIPGITTGQLLAGINALDAVSYEIVIIFMVAIANLLTTVL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKGLCRQFFNSAAQLVR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGLISLDLVDLVMAVGLMAIAIGLSAWEGLGLELNLAIATGRTILQLLVLGYVLDFIFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
LDNPWAVLAILGVILTITAIVARNRISQKIPYVLPLVWGAIFISTTLTVFYTTFLIIQPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCC
RWYEPRYVIPLAGMVLGNAMNAAAIAGERLVSSMNSFPTEIETHLSLGATPAQAVSQYRK
CCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
EAIRAALLPTLNQMMLVGMVAIPGITTGQLLAGINALDAVSYEIVIIFMVAIANLLTTVL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTKGLCRQFFNSAAQLVR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]