| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230484
Identifier: 17230484
GI number: 17230484
Start: 3636103
End: 3636972
Strand: Reverse
Name: 17230484
Synonym: all2992
Alternate gene names: NA
Gene position: 3636972-3636103 (Counterclockwise)
Preceding gene: 17230487
Following gene: 17230481
Centisome position: 56.71
GC content: 41.38
Gene sequence:
>870_bases ATGACTAAAGCCGCAGACATCAGCACCAAAAAATTAATCAGCCTAGCACCCAACAACTGGGTAAGATGGGTGACACAGCT TTCTGATGTTGTCGCTGGAGAAATTCTCAGTTCTGATTTTCAATGGATTAGCCGAGAGAGTGATGTTTTAATTCGTGTCA CCAGTCCTGAATACGGTGAATTTTTAGTCCTCAACGAATTACAGTTACGCTATCAACCCCAAATGCCAAGACGGATGAGG GCTTATGCGGCACTGGCAGAAGAAAAGTATAATTTACCTACATATCCCGTTTTAATCAATATTCTCAAAACTAGTAACGA AGAAGTACCCACAAGCTTTACATCAAATCTTGCAGGATTACGGGCGATACAAGATTATCGAGTCATTAATCTTTGGGAAG TTGATGTAAATATTGCTTTCCAACAACCTTTACCTTCCCTACTTCCCTTTGTACCCCTTCTTAAGGGTGGTGAGAATGAG TTAATCATTCGAGAAGCGTTGCAAATGCTGCGTGCGGACGAACAACTCAATCAGTTAGAAACAGTCCTAGCTTTTTTTGC TACGTTTGTGTTAGAGAGTGCTTTAGTTCAAGAAATTATGAGGTGGGATATGGCTGTTTTACGTGAATCGCCTTGGTATC AAGAAATTTTGCGAGAAGGTGAAGCACGCGGTGAAGCACGCGGTGAAGCGCGCGGTCAACTGCTGGGATTGATGTCCGGT ATTGAAACTAATTTAGAAGCAAAGTTTGGCCAAAACGGTTTAGAACTATTGCCACAAATTAGTCAAGTTGAAGATTTAGT CACTTTAAAGGAAATCTTACGCAAAATTGTTGCTGCCAAAACAATTGAAGAATTGCGGCAGATGCTGTAG
Upstream 100 bases:
>100_bases GTCAAACTTCCGTGTCTGAATCTCTTTATAGTGAAAGCTTCAAGCAGGGAGCTTCTTTAAGTTACGATAAATTTTATTGC TTGAGTGCGTTCACCACATA
Downstream 100 bases:
>100_bases TGTTATTGCTCACATACATTAAATTAAATCAGCGCGGGGTTTAAATGTTTCAATTTGCCGGAGTTTTTCGTAAAGTTCTT TTTCTTCTTGACTGATCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTKAADISTKKLISLAPNNWVRWVTQLSDVVAGEILSSDFQWISRESDVLIRVTSPEYGEFLVLNELQLRYQPQMPRRMR AYAALAEEKYNLPTYPVLINILKTSNEEVPTSFTSNLAGLRAIQDYRVINLWEVDVNIAFQQPLPSLLPFVPLLKGGENE LIIREALQMLRADEQLNQLETVLAFFATFVLESALVQEIMRWDMAVLRESPWYQEILREGEARGEARGEARGQLLGLMSG IETNLEAKFGQNGLELLPQISQVEDLVTLKEILRKIVAAKTIEELRQML
Sequences:
>Translated_289_residues MTKAADISTKKLISLAPNNWVRWVTQLSDVVAGEILSSDFQWISRESDVLIRVTSPEYGEFLVLNELQLRYQPQMPRRMR AYAALAEEKYNLPTYPVLINILKTSNEEVPTSFTSNLAGLRAIQDYRVINLWEVDVNIAFQQPLPSLLPFVPLLKGGENE LIIREALQMLRADEQLNQLETVLAFFATFVLESALVQEIMRWDMAVLRESPWYQEILREGEARGEARGEARGQLLGLMSG IETNLEAKFGQNGLELLPQISQVEDLVTLKEILRKIVAAKTIEELRQML >Mature_288_residues TKAADISTKKLISLAPNNWVRWVTQLSDVVAGEILSSDFQWISRESDVLIRVTSPEYGEFLVLNELQLRYQPQMPRRMRA YAALAEEKYNLPTYPVLINILKTSNEEVPTSFTSNLAGLRAIQDYRVINLWEVDVNIAFQQPLPSLLPFVPLLKGGENEL IIREALQMLRADEQLNQLETVLAFFATFVLESALVQEIMRWDMAVLRESPWYQEILREGEARGEARGEARGQLLGLMSGI ETNLEAKFGQNGLELLPQISQVEDLVTLKEILRKIVAAKTIEELRQML
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32946; Mature: 32814
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAADISTKKLISLAPNNWVRWVTQLSDVVAGEILSSDFQWISRESDVLIRVTSPEYGE CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC FLVLNELQLRYQPQMPRRMRAYAALAEEKYNLPTYPVLINILKTSNEEVPTSFTSNLAGL EEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH RAIQDYRVINLWEVDVNIAFQQPLPSLLPFVPLLKGGENELIIREALQMLRADEQLNQLE HHHHHCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TVLAFFATFVLESALVQEIMRWDMAVLRESPWYQEILREGEARGEARGEARGQLLGLMSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IETNLEAKFGQNGLELLPQISQVEDLVTLKEILRKIVAAKTIEELRQML HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TKAADISTKKLISLAPNNWVRWVTQLSDVVAGEILSSDFQWISRESDVLIRVTSPEYGE CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC FLVLNELQLRYQPQMPRRMRAYAALAEEKYNLPTYPVLINILKTSNEEVPTSFTSNLAGL EEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH RAIQDYRVINLWEVDVNIAFQQPLPSLLPFVPLLKGGENELIIREALQMLRADEQLNQLE HHHHHCEEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TVLAFFATFVLESALVQEIMRWDMAVLRESPWYQEILREGEARGEARGEARGQLLGLMSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IETNLEAKFGQNGLELLPQISQVEDLVTLKEILRKIVAAKTIEELRQML HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA