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The map label for this gene is 17230480

Identifier: 17230480

GI number: 17230480

Start: 3630982

End: 3631548

Strand: Direct

Name: 17230480

Synonym: alr2988

Alternate gene names: NA

Gene position: 3630982-3631548 (Clockwise)

Preceding gene: 17230479

Following gene: 17230482

Centisome position: 56.61

GC content: 40.39

Gene sequence:

>567_bases
ATGCAAACAGCCAGTAAGCCTTTGAGCCTAGCTGAATTTTTAATACTGCCAGAGACAAAACCCGCTAATGAGTTTATTGA
TGGTTATATATACCAAAAACCCATGCCCCAAGGAAAGCATAGTACTCTACAGATTCGACTTGCAGATGGTATCAATGAGG
TAGGCTTTCCCAGTAAAACCGCTTACGCTTTTCCAGAATTGAGGTGTACGTTTTCTGGACGTTCAATTGTTCCCGATATT
GCTGTATTTCGTTGGGAGAAAATCCCCTTTGATGCAGATGGCGAGGTAGCTAATGCTTTTGAAATTCCTCCCGATTGGAC
AATTGAAATTCTCTCACCGGAGCAATCGCAAACACGAGTCACAGACAATATACTTTTTTGCTTACGCCATCAAACTAGTT
TAGGATGGTTGATTGATCCAGCTGAGAAAGCGGTTATTTGCTTTTTACCCAATCAATTACCAGAAATCAAACGACAATTT
GATGATATTTTACCTGTGCCAGATTTTCTGGATTTCAGATTGACAGTTGGGCAATTATTTGCATGGCTGAAATTGGGATT
CCAGTAA

Upstream 100 bases:

>100_bases
AAATATTGACGATTTAACTAGTTTATCTCCCAATGTGCGTTCTCATGATCTGGGTGAAACTTCAAATGTGACAATATAAG
AAATTGGCAAAGCAAAACTT

Downstream 100 bases:

>100_bases
CTTTGTTCACAGCCGTCGGATACTTATTTCCAAGCCTTCACACACACTTGTGAGAAAATCTAAATCGAGAGTAGCGATCG
CATCACTAGCTTGATGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQTASKPLSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKTAYAFPELRCTFSGRSIVPDI
AVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRVTDNILFCLRHQTSLGWLIDPAEKAVICFLPNQLPEIKRQF
DDILPVPDFLDFRLTVGQLFAWLKLGFQ

Sequences:

>Translated_188_residues
MQTASKPLSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKTAYAFPELRCTFSGRSIVPDI
AVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRVTDNILFCLRHQTSLGWLIDPAEKAVICFLPNQLPEIKRQF
DDILPVPDFLDFRLTVGQLFAWLKLGFQ
>Mature_188_residues
MQTASKPLSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKTAYAFPELRCTFSGRSIVPDI
AVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRVTDNILFCLRHQTSLGWLIDPAEKAVICFLPNQLPEIKRQF
DDILPVPDFLDFRLTVGQLFAWLKLGFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21370; Mature: 21370

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTASKPLSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKT
CCCCCCCCCHHHEEEECCCCCHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC
AYAFPELRCTFSGRSIVPDIAVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRV
EEECCCEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHH
TDNILFCLRHQTSLGWLIDPAEKAVICFLPNQLPEIKRQFDDILPVPDFLDFRLTVGQLF
HHHEEEEEECCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
AWLKLGFQ
HHHHHCCC
>Mature Secondary Structure
MQTASKPLSLAEFLILPETKPANEFIDGYIYQKPMPQGKHSTLQIRLADGINEVGFPSKT
CCCCCCCCCHHHEEEECCCCCHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC
AYAFPELRCTFSGRSIVPDIAVFRWEKIPFDADGEVANAFEIPPDWTIEILSPEQSQTRV
EEECCCEEEEECCCCCCCCHHHEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCHHHH
TDNILFCLRHQTSLGWLIDPAEKAVICFLPNQLPEIKRQFDDILPVPDFLDFRLTVGQLF
HHHEEEEEECCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
AWLKLGFQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA