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The map label for this gene is yneE [C]

Identifier: 17230479

GI number: 17230479

Start: 3630037

End: 3630960

Strand: Direct

Name: yneE [C]

Synonym: alr2987

Alternate gene names: 17230479

Gene position: 3630037-3630960 (Clockwise)

Preceding gene: 17230478

Following gene: 17230480

Centisome position: 56.6

GC content: 34.52

Gene sequence:

>924_bases
ATGACTGTTGCAAAAAAGCACTGGTTTCAAATAGCTTTTCAACTTAGAGGCTCAGTTATTGGCGCAATTTACAAACGCGT
TATTTGCTGTGCTTTATTTGGGGTATTAGTTACTTTACTTTATCAACTAAAAATTCCAGTATCTCAACCAATTTTAGGTA
GCGTTATTCCTAGTATTGTTCTAGGTTTATTACTCGTTTTTCGGACAAATACTGCTTATGATCGTTTTTGGGAAGGGAGG
AAAGCCTGGGGTTCTATAGTCAACAATACCCGTAATCTAGCTAGACAAATTTGGGTATCAGTGGAGGAAGTATCACTAAA
GGATAGAGAAGCTAAAATATCAGTTTTAAATTTACTAGTAGCTTTTGCTGTAGCTACTAAATTGCATTTGCGTGGAGAAC
CGATAAATAGTGAACTAGAAGATTTGATATCAACTTCTCGATATTTCAAACTTAAGAGCATGAATAATCCGCCTTTAGAA
GTAGCGTTCTGGATTGGAGATTATTTACAACAGCAATATACTTGCAAGTGCTTAAATAGTTATCAATTAACATCTATACA
AGAATTATTAAACAATTTAGTTGATAATTTAGGTTCTTGTGAACGGATTCTCAGAACACCTATGCCTTTAGCTTATTCTA
TACATCTCAAGCAATTATTATTATTATATTGTTTTCTCCTGCCTTTTCAAATGGTGGAGAGTTTGGGTTGGTGGACGGGT
TTAGTTGTGGGGTTAGTGAGTTTTACATTATTTGGTATTGAAGCGATTGGCTTAGAGATTGAAAATCCTTTTGGCTATGA
TCCTAACGATTTACCATTAGATGCTATCTGTAACACTATGAAGCGAAATATTGACGATTTAACTAGTTTATCTCCCAATG
TGCGTTCTCATGATCTGGGTGAAACTTCAAATGTGACAATATAA

Upstream 100 bases:

>100_bases
GTAAATTCCTCAATGCCAACTGTGCTACTTATGGAGTTATGATTTTTAAGTTATTAAATCTTAGCTGATGAGTTCGCCCA
GTATTTTTTAGGTTAATGAG

Downstream 100 bases:

>100_bases
GAAATTGGCAAAGCAAAACTTATGCAAACAGCCAGTAAGCCTTTGAGCCTAGCTGAATTTTTAATACTGCCAGAGACAAA
ACCCGCTAATGAGTTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTVAKKHWFQIAFQLRGSVIGAIYKRVICCALFGVLVTLLYQLKIPVSQPILGSVIPSIVLGLLLVFRTNTAYDRFWEGR
KAWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLVAFAVATKLHLRGEPINSELEDLISTSRYFKLKSMNNPPLE
VAFWIGDYLQQQYTCKCLNSYQLTSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTG
LVVGLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDDLTSLSPNVRSHDLGETSNVTI

Sequences:

>Translated_307_residues
MTVAKKHWFQIAFQLRGSVIGAIYKRVICCALFGVLVTLLYQLKIPVSQPILGSVIPSIVLGLLLVFRTNTAYDRFWEGR
KAWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLVAFAVATKLHLRGEPINSELEDLISTSRYFKLKSMNNPPLE
VAFWIGDYLQQQYTCKCLNSYQLTSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTG
LVVGLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDDLTSLSPNVRSHDLGETSNVTI
>Mature_306_residues
TVAKKHWFQIAFQLRGSVIGAIYKRVICCALFGVLVTLLYQLKIPVSQPILGSVIPSIVLGLLLVFRTNTAYDRFWEGRK
AWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLVAFAVATKLHLRGEPINSELEDLISTSRYFKLKSMNNPPLEV
AFWIGDYLQQQYTCKCLNSYQLTSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTGL
VVGLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDDLTSLSPNVRSHDLGETSNVTI

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family

Homologues:

Organism=Escherichia coli, GI87081925, Length=279, Percent_Identity=29.7491039426523, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2987_NOSS1 (Q8YSU5)

Other databases:

- EMBL:   BA000019
- PIR:   AD2179
- RefSeq:   NP_487027.1
- STRING:   Q8YSU5
- GeneID:   1106585
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2987
- NMPDR:   fig|103690.1.peg.3294
- eggNOG:   COG3781
- HOGENOM:   HBG520274
- OMA:   FWIGDYL
- PhylomeDB:   Q8YSU5
- ProtClustDB:   CLSK892598
- BioCyc:   NSP103690:ALR2987-MONOMER
- InterPro:   IPR021134

Pfam domain/function: PF01062 Bestrophin

EC number: NA

Molecular weight: Translated: 34686; Mature: 34555

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1141e7e4)-; HASH(0x11ffc6b0)-; HASH(0x103bcb64)-; HASH(0x120f03a8)-;

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCH
>Mature Secondary Structure 
TVAKKHWFQIAFQLRGSVIGAIYKRVICCALFGVLVTLLYQLKIPVSQPILGSVIPSIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LGLLLVFRTNTAYDRFWEGRKAWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAVATKLHLRGEPINSELEDLISTSRYFKLKSMNNPPLEVAFWIGDYLQQQYTCKCLNS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCC
YQLTSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVGLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDDLTSLSPNVRSHDLG
HHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCC
ETSNVTI
CCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840