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The map label for this gene is yibA [C]

Identifier: 17230478

GI number: 17230478

Start: 3627154

End: 3629811

Strand: Direct

Name: yibA [C]

Synonym: alr2986

Alternate gene names: 17230478

Gene position: 3627154-3629811 (Clockwise)

Preceding gene: 17230477

Following gene: 17230479

Centisome position: 56.55

GC content: 43.27

Gene sequence:

>2658_bases
ATGGAACCTTTAACTACTGCTGCGATGTCTGACGACAAGCTGCAACCCTGTGGAAACAACAAAACCAAACGCATCTACGC
AATTAGCTCTGTAGTCAGCAATAAAACCTTAACAAAAATGAGTAAGAGAACAGTTAAGAGATTATTAACTGTCAGTGCAG
TTTCTTTCTCTTGTCTCTGGTTGTCTGTAATGCCAATGAGTAAGGTATGGGCGCAAATTAGTCAAGATCCAGAAATTTCT
ACCTATATTCAACAGTTAAAAGACAAAGATGCAAATGTTCGCTTTAATGCTGCTTCTGCCCTGTGGAACATGGGAGGGGA
AGCAAAGGCAGCAATTCCCTCTTTGATTCTGGCTTTGCAGTCCGACAAAGATGCAAATGTTCGCTCTACTGCTGCTTTTG
CCCTGGGGAGCATGGGAGGGGAAGCAAAGGCAGCAATTCCCTCTTTGATTCTGGCTTTGCAGTCCGACAAAGATGCAAAT
GTTCGCTCTACTGCTGCTTTTGCCCTGGGGAGGATGGGAGGGGAAGCAAAGGCAGCGATTCCCTCTTTGATTCAGGCTTT
GCAGTCCGACAAAGATGCAAATGTTCGCTCTACTGCTGCTTTTGCCCTGGGGAGGATGGGAGGGGAAGCAAAGGCAGCAA
TTCCCTCTTTGATTCTGGCTTTGCAGTCCGACAAAGATGCAAATGTTCGCTCTACTGCTGCTTTTGCCCTGGGGAGGATG
GGAGGGGAAGCAAAGGCAGCGATTCCCTCTTTGATTCAGGCTTTGCAGTCCGACAAAGATGCAAATGTTCGCTCTACTGC
TGCTAATGTCCTGGGGAGCATGGGAGGGGAAGCAAAGGCAGCAATTCCCTCTTTGATTCTGGCTTTGCAGTCCGACAAAG
ATGCAAATGTTCGCTTTAATGCTGCTGATGCTTTAGCAACAATAAGTGCCAGCTTTCAAGACAAGGCAGGTACTATGGCT
TTTGCAGAGTTAGACAAAGCCATAGAGGATTTAGAAAAAGTACTCAAAGCGTTAAAGGATAATAAAGATAAAAATTTAGA
CACCAGCATTACCTCTGTCAATCGTTCTCTTGATGCCTTAAAAACCAAAAGACAATCTCGCCTCCTTGACAGAACTTTAG
AATGGATGACGAAAAACCCTTGGGTAACAGGGGGATTAATTTACATTATCTTCTTCCCCTCCCTCTGGCTCATCTTGTTG
CGGGTGCGTCCTTTGTGGGTATTACACGTCAACAATGCCCTTAAACCTTTATCTAGTTTTAAATTACCCGATGCCCTTGG
CGGTGTAGCTTTCCCGATTCGCACATTATTATTTATCGAATTTTTTAACTATCACCCCAGAGTCCTTGATGCTTGGGTAG
AAAAACGCCTCACCTCTGCCAAAGAAGGATTTAACAAAAAGAAAACTGTCACAGAACGTTCGATTTTCGTCCCCATTCCC
GTAGTTTTAGATAATAATAATCTCGCTCAATTTACAGCCACAGACTTACAACTAATATTTAACCAAAAACGTGCAACATT
ATTAATTTGGGGAGAAGGTGGTGCAGGTAAAACCAGTCTGGCTTGTACTTTGGCGCAATGGGCAATGAATGACAATGAAA
GTCAGCGCCTATCTAAACACCAAATGTTACCAGTCTTAATTGAACAAGAATTAGATCATCCTTTAAAAGAAACTATCGGC
GGACAACTGCAAGCACTTATCAGCGAAACCAAAACAATTGACGATGAATTGTTAACTAATTTACTCCGTCAACGCCGAAT
TTTAGTCATAGTAGATCACTTTTCGGAAATGAGTGAAGCGACACGCAACAAAATTCATCCCGCAGAAAAAGATTTCCCGG
TAAACGCCCTCATTGTCACTTCTCGCGTAGAAGAAAAATTAAACGAAGTACCCAAAACCACAATTCAACCCCTGCGGGTT
GCTGGTGATAGACTCTCATCTTTCATGGAAGCTTATTTAACACAACGCCGCAAACGTGATTTGTTTACTGATGTGGAATA
TTTTGATGCTTGTCACCGTCTTTCGTTGATGGTAGGACAACGCAATATTACCGTGTTACTGGCGAAACTCTACGCTGAAC
AAATGATTGCCACAAAAGAAGGAACAGCAAGTGATTTACCAGAAAATATCCCTGATTTAATGCTGGCATACCTCAACGAA
CTTAACCGGGATAGATTAGAAACTGAACCAAATAATCGCACTGTCCAAAGAGATGCGAAGGTAATTGCTTGGCAATGTCT
AAAAACCACTTTCCGTCCCACATCAGCCAAACTAGAAGATATCTTAGCCGCCCTTGATGACGGTAATAAAGTAGAAGAAC
GTTTACAACATTTAGAAAAACGCCTGCGTCTCATTCAAACTATCGGCGCAGCCCAAGATAAAATCCGCTTGGCATTAGAT
CCCTTAGCTGAGTATCTAGCTGGTTTATATTTAATAGATAGCTACGGTGGAGATACAGCATCTTGGCGAGGCTTTCTCTC
ACAAGTCAATACTATACCCGATGTGGAATTAATTAAAGGTTTCCTCTTAGCCGTGCAGGATTGTTGTTTAGCATTGGGCA
ACGAAGCCGGAGTTCCCGACTTTGTGGCGGACGAACTAGCCTTGAAGACTGCTTTAACTACACCAGCACCTACTGTGTTA
GTTGGTAATTCGCAATGA

Upstream 100 bases:

>100_bases
TGACAAGGCGTAAATCTAAATTATTTAAGTTAAATTGCGTAATTTACGGCTAAATCCGTGTCTTACTAAGTAAGTAAGAT
GCACCTCAACAAATTAGCAA

Downstream 100 bases:

>100_bases
TGCAGCGCTCATATTCTACATAGCCTAAGTAAATGCGTCTAAGCATTTGTCCTATCAGCTTGTGCAGTAGAGCAAAACTA
TTACACCAAGTCTCAACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: PBS Lyase HEAT-Like Repeat Domain Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Signal Transduction Protein With Nacht Domain; HEAT Domain Containing Protein; Heat Domain-Containing Protein; SH3 Type 3 Domain-Containing Protein; Ser/Thr Protein Phosphatase Family Protein; Phycocyanin Alpha-Subunit Phycocyanobilin Lyase; NACHT Domain Family; Phytanoyl-CoA Dioxygenase; Peptidase; Signal Transduction Protein; PBS Lyase HEAT Domain-Containing Protein; HEAT Domain-Containing Protein

Number of amino acids: Translated: 885; Mature: 885

Protein sequence:

>885_residues
MEPLTTAAMSDDKLQPCGNNKTKRIYAISSVVSNKTLTKMSKRTVKRLLTVSAVSFSCLWLSVMPMSKVWAQISQDPEIS
TYIQQLKDKDANVRFNAASALWNMGGEAKAAIPSLILALQSDKDANVRSTAAFALGSMGGEAKAAIPSLILALQSDKDAN
VRSTAAFALGRMGGEAKAAIPSLIQALQSDKDANVRSTAAFALGRMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRM
GGEAKAAIPSLIQALQSDKDANVRSTAANVLGSMGGEAKAAIPSLILALQSDKDANVRFNAADALATISASFQDKAGTMA
FAELDKAIEDLEKVLKALKDNKDKNLDTSITSVNRSLDALKTKRQSRLLDRTLEWMTKNPWVTGGLIYIIFFPSLWLILL
RVRPLWVLHVNNALKPLSSFKLPDALGGVAFPIRTLLFIEFFNYHPRVLDAWVEKRLTSAKEGFNKKKTVTERSIFVPIP
VVLDNNNLAQFTATDLQLIFNQKRATLLIWGEGGAGKTSLACTLAQWAMNDNESQRLSKHQMLPVLIEQELDHPLKETIG
GQLQALISETKTIDDELLTNLLRQRRILVIVDHFSEMSEATRNKIHPAEKDFPVNALIVTSRVEEKLNEVPKTTIQPLRV
AGDRLSSFMEAYLTQRRKRDLFTDVEYFDACHRLSLMVGQRNITVLLAKLYAEQMIATKEGTASDLPENIPDLMLAYLNE
LNRDRLETEPNNRTVQRDAKVIAWQCLKTTFRPTSAKLEDILAALDDGNKVEERLQHLEKRLRLIQTIGAAQDKIRLALD
PLAEYLAGLYLIDSYGGDTASWRGFLSQVNTIPDVELIKGFLLAVQDCCLALGNEAGVPDFVADELALKTALTTPAPTVL
VGNSQ

Sequences:

>Translated_885_residues
MEPLTTAAMSDDKLQPCGNNKTKRIYAISSVVSNKTLTKMSKRTVKRLLTVSAVSFSCLWLSVMPMSKVWAQISQDPEIS
TYIQQLKDKDANVRFNAASALWNMGGEAKAAIPSLILALQSDKDANVRSTAAFALGSMGGEAKAAIPSLILALQSDKDAN
VRSTAAFALGRMGGEAKAAIPSLIQALQSDKDANVRSTAAFALGRMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRM
GGEAKAAIPSLIQALQSDKDANVRSTAANVLGSMGGEAKAAIPSLILALQSDKDANVRFNAADALATISASFQDKAGTMA
FAELDKAIEDLEKVLKALKDNKDKNLDTSITSVNRSLDALKTKRQSRLLDRTLEWMTKNPWVTGGLIYIIFFPSLWLILL
RVRPLWVLHVNNALKPLSSFKLPDALGGVAFPIRTLLFIEFFNYHPRVLDAWVEKRLTSAKEGFNKKKTVTERSIFVPIP
VVLDNNNLAQFTATDLQLIFNQKRATLLIWGEGGAGKTSLACTLAQWAMNDNESQRLSKHQMLPVLIEQELDHPLKETIG
GQLQALISETKTIDDELLTNLLRQRRILVIVDHFSEMSEATRNKIHPAEKDFPVNALIVTSRVEEKLNEVPKTTIQPLRV
AGDRLSSFMEAYLTQRRKRDLFTDVEYFDACHRLSLMVGQRNITVLLAKLYAEQMIATKEGTASDLPENIPDLMLAYLNE
LNRDRLETEPNNRTVQRDAKVIAWQCLKTTFRPTSAKLEDILAALDDGNKVEERLQHLEKRLRLIQTIGAAQDKIRLALD
PLAEYLAGLYLIDSYGGDTASWRGFLSQVNTIPDVELIKGFLLAVQDCCLALGNEAGVPDFVADELALKTALTTPAPTVL
VGNSQ
>Mature_885_residues
MEPLTTAAMSDDKLQPCGNNKTKRIYAISSVVSNKTLTKMSKRTVKRLLTVSAVSFSCLWLSVMPMSKVWAQISQDPEIS
TYIQQLKDKDANVRFNAASALWNMGGEAKAAIPSLILALQSDKDANVRSTAAFALGSMGGEAKAAIPSLILALQSDKDAN
VRSTAAFALGRMGGEAKAAIPSLIQALQSDKDANVRSTAAFALGRMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRM
GGEAKAAIPSLIQALQSDKDANVRSTAANVLGSMGGEAKAAIPSLILALQSDKDANVRFNAADALATISASFQDKAGTMA
FAELDKAIEDLEKVLKALKDNKDKNLDTSITSVNRSLDALKTKRQSRLLDRTLEWMTKNPWVTGGLIYIIFFPSLWLILL
RVRPLWVLHVNNALKPLSSFKLPDALGGVAFPIRTLLFIEFFNYHPRVLDAWVEKRLTSAKEGFNKKKTVTERSIFVPIP
VVLDNNNLAQFTATDLQLIFNQKRATLLIWGEGGAGKTSLACTLAQWAMNDNESQRLSKHQMLPVLIEQELDHPLKETIG
GQLQALISETKTIDDELLTNLLRQRRILVIVDHFSEMSEATRNKIHPAEKDFPVNALIVTSRVEEKLNEVPKTTIQPLRV
AGDRLSSFMEAYLTQRRKRDLFTDVEYFDACHRLSLMVGQRNITVLLAKLYAEQMIATKEGTASDLPENIPDLMLAYLNE
LNRDRLETEPNNRTVQRDAKVIAWQCLKTTFRPTSAKLEDILAALDDGNKVEERLQHLEKRLRLIQTIGAAQDKIRLALD
PLAEYLAGLYLIDSYGGDTASWRGFLSQVNTIPDVELIKGFLLAVQDCCLALGNEAGVPDFVADELALKTALTTPAPTVL
VGNSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97079; Mature: 97079

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00337 BETA_LACTAMASE_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLTTAAMSDDKLQPCGNNKTKRIYAISSVVSNKTLTKMSKRTVKRLLTVSAVSFSCLW
CCCCCCHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVMPMSKVWAQISQDPEISTYIQQLKDKDANVRFNAASALWNMGGEAKAAIPSLILALQ
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHC
SDKDANVRSTAAFALGSMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRMGGEAKAAI
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
PSLIQALQSDKDANVRSTAAFALGRMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRM
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GGEAKAAIPSLIQALQSDKDANVRSTAANVLGSMGGEAKAAIPSLILALQSDKDANVRFN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE
AADALATISASFQDKAGTMAFAELDKAIEDLEKVLKALKDNKDKNLDTSITSVNRSLDAL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KTKRQSRLLDRTLEWMTKNPWVTGGLIYIIFFPSLWLILLRVRPLWVLHVNNALKPLSSF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHC
KLPDALGGVAFPIRTLLFIEFFNYHPRVLDAWVEKRLTSAKEGFNKKKTVTERSIFVPIP
CCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEE
VVLDNNNLAQFTATDLQLIFNQKRATLLIWGEGGAGKTSLACTLAQWAMNDNESQRLSKH
EEECCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
QMLPVLIEQELDHPLKETIGGQLQALISETKTIDDELLTNLLRQRRILVIVDHFSEMSEA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHH
TRNKIHPAEKDFPVNALIVTSRVEEKLNEVPKTTIQPLRVAGDRLSSFMEAYLTQRRKRD
HHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTDVEYFDACHRLSLMVGQRNITVLLAKLYAEQMIATKEGTASDLPENIPDLMLAYLNE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHH
LNRDRLETEPNNRTVQRDAKVIAWQCLKTTFRPTSAKLEDILAALDDGNKVEERLQHLEK
HCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RLRLIQTIGAAQDKIRLALDPLAEYLAGLYLIDSYGGDTASWRGFLSQVNTIPDVELIKG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHH
FLLAVQDCCLALGNEAGVPDFVADELALKTALTTPAPTVLVGNSQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
>Mature Secondary Structure
MEPLTTAAMSDDKLQPCGNNKTKRIYAISSVVSNKTLTKMSKRTVKRLLTVSAVSFSCLW
CCCCCCHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVMPMSKVWAQISQDPEISTYIQQLKDKDANVRFNAASALWNMGGEAKAAIPSLILALQ
HHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHC
SDKDANVRSTAAFALGSMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRMGGEAKAAI
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
PSLIQALQSDKDANVRSTAAFALGRMGGEAKAAIPSLILALQSDKDANVRSTAAFALGRM
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GGEAKAAIPSLIQALQSDKDANVRSTAANVLGSMGGEAKAAIPSLILALQSDKDANVRFN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE
AADALATISASFQDKAGTMAFAELDKAIEDLEKVLKALKDNKDKNLDTSITSVNRSLDAL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KTKRQSRLLDRTLEWMTKNPWVTGGLIYIIFFPSLWLILLRVRPLWVLHVNNALKPLSSF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHC
KLPDALGGVAFPIRTLLFIEFFNYHPRVLDAWVEKRLTSAKEGFNKKKTVTERSIFVPIP
CCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEE
VVLDNNNLAQFTATDLQLIFNQKRATLLIWGEGGAGKTSLACTLAQWAMNDNESQRLSKH
EEECCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
QMLPVLIEQELDHPLKETIGGQLQALISETKTIDDELLTNLLRQRRILVIVDHFSEMSEA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHH
TRNKIHPAEKDFPVNALIVTSRVEEKLNEVPKTTIQPLRVAGDRLSSFMEAYLTQRRKRD
HHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTDVEYFDACHRLSLMVGQRNITVLLAKLYAEQMIATKEGTASDLPENIPDLMLAYLNE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHH
LNRDRLETEPNNRTVQRDAKVIAWQCLKTTFRPTSAKLEDILAALDDGNKVEERLQHLEK
HCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RLRLIQTIGAAQDKIRLALDPLAEYLAGLYLIDSYGGDTASWRGFLSQVNTIPDVELIKG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHH
FLLAVQDCCLALGNEAGVPDFVADELALKTALTTPAPTVLVGNSQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA