| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230452
Identifier: 17230452
GI number: 17230452
Start: 3601306
End: 3602052
Strand: Reverse
Name: 17230452
Synonym: all2960
Alternate gene names: NA
Gene position: 3602052-3601306 (Counterclockwise)
Preceding gene: 17230453
Following gene: 17230448
Centisome position: 56.16
GC content: 33.6
Gene sequence:
>747_bases ATGTTGAAAGAAGCAGCACTCTACCATCGTCATTTTGATGGAACACTTTATCCCCTAACCCATAAAGAATCTAATTTACC TATTTTATCTAGAGTAATTTTAAATGGCGAGTCTTGCTATATAGCCCAAGGTATACAATCAAATAAACAGAATCCTCTTC GCAGCGTCAGCAATATTCTGAAACTAACACAAGAAGAAAGCTCTAAAGAAGCTCTTCGTGAGTGGATGCTTAGAGTAGGG CAACAAGAAGCTAACCGTATTAGAAATGAAGCAGTTAAAGCAGGAAATGCTATTCATGCTTATCTTCATTCTCACTTAAT GGGAAAAAAAGCTAAACCTGTTGACAAACTTTATCAAAATTATCTTCAATCTCTTAATACATTGTTGCCCAATTTTGGAG AAACTATACTATCAGAACAATTTGTTGTAAGCTTCAAATATCGGTATTTTGGTAAAATTGACCACTTAGGTTTTTATAGA AAAACTTTAACCCTTAGTGACTTCAAAACTTCTATAAAGCCCAAAGTTTCCATAAATTGGATTCAGGATAAGATTATTCA ATTAGCAGCTTACTATATCCCAATTGAAACTCTATATCCTGTTGAACAAGCAGCGTTAATTTATTTGATTAACGATGGTT CTTATAATGAATTCATTATAACTCCACAAGAGATGAACCTGTACAAGGAAATATGGCTTGAGAGAGTATCTCAGGCTAGT GCGATAAAAACTTTGAAAGCATCATAA
Upstream 100 bases:
>100_bases AGGTTTAAAATCACAGGTACAGCAGATTCATAAAGCTAACAATACTCAAACAAATGAAAATTGAATATTTATTCAGTTCA ATTCAATAACTGTAAGAATA
Downstream 100 bases:
>100_bases TAAATTCGCTCATGATAGCTAATCAGTCACATAATAGTCTCGGCTACCACCATGATACTTTTGAGAAAAACATATCTATA CTAATAGAGTTCTAAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLKEAALYHRHFDGTLYPLTHKESNLPILSRVILNGESCYIAQGIQSNKQNPLRSVSNILKLTQEESSKEALREWMLRVG QQEANRIRNEAVKAGNAIHAYLHSHLMGKKAKPVDKLYQNYLQSLNTLLPNFGETILSEQFVVSFKYRYFGKIDHLGFYR KTLTLSDFKTSIKPKVSINWIQDKIIQLAAYYIPIETLYPVEQAALIYLINDGSYNEFIITPQEMNLYKEIWLERVSQAS AIKTLKAS
Sequences:
>Translated_248_residues MLKEAALYHRHFDGTLYPLTHKESNLPILSRVILNGESCYIAQGIQSNKQNPLRSVSNILKLTQEESSKEALREWMLRVG QQEANRIRNEAVKAGNAIHAYLHSHLMGKKAKPVDKLYQNYLQSLNTLLPNFGETILSEQFVVSFKYRYFGKIDHLGFYR KTLTLSDFKTSIKPKVSINWIQDKIIQLAAYYIPIETLYPVEQAALIYLINDGSYNEFIITPQEMNLYKEIWLERVSQAS AIKTLKAS >Mature_248_residues MLKEAALYHRHFDGTLYPLTHKESNLPILSRVILNGESCYIAQGIQSNKQNPLRSVSNILKLTQEESSKEALREWMLRVG QQEANRIRNEAVKAGNAIHAYLHSHLMGKKAKPVDKLYQNYLQSLNTLLPNFGETILSEQFVVSFKYRYFGKIDHLGFYR KTLTLSDFKTSIKPKVSINWIQDKIIQLAAYYIPIETLYPVEQAALIYLINDGSYNEFIITPQEMNLYKEIWLERVSQAS AIKTLKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28601; Mature: 28601
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEAALYHRHFDGTLYPLTHKESNLPILSRVILNGESCYIAQGIQSNKQNPLRSVSNIL CCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH KLTQEESSKEALREWMLRVGQQEANRIRNEAVKAGNAIHAYLHSHLMGKKAKPVDKLYQN HHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH YLQSLNTLLPNFGETILSEQFVVSFKYRYFGKIDHLGFYRKTLTLSDFKTSIKPKVSINW HHHHHHHHCCCHHHHHHCCHHHEEEHHHHHCCHHHHHHHHHHEEHHHHHHCCCCCEEHHH IQDKIIQLAAYYIPIETLYPVEQAALIYLINDGSYNEFIITPQEMNLYKEIWLERVSQAS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH AIKTLKAS HHHHHCCC >Mature Secondary Structure MLKEAALYHRHFDGTLYPLTHKESNLPILSRVILNGESCYIAQGIQSNKQNPLRSVSNIL CCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH KLTQEESSKEALREWMLRVGQQEANRIRNEAVKAGNAIHAYLHSHLMGKKAKPVDKLYQN HHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH YLQSLNTLLPNFGETILSEQFVVSFKYRYFGKIDHLGFYRKTLTLSDFKTSIKPKVSINW HHHHHHHHCCCHHHHHHCCHHHEEEHHHHHCCHHHHHHHHHHEEHHHHHHCCCCCEEHHH IQDKIIQLAAYYIPIETLYPVEQAALIYLINDGSYNEFIITPQEMNLYKEIWLERVSQAS HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH AIKTLKAS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA