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The map label for this gene is rlpA [C]

Identifier: 17230427

GI number: 17230427

Start: 3572277

End: 3573392

Strand: Direct

Name: rlpA [C]

Synonym: alr2935

Alternate gene names: 17230427

Gene position: 3572277-3573392 (Clockwise)

Preceding gene: 17230425

Following gene: 17230428

Centisome position: 55.7

GC content: 46.24

Gene sequence:

>1116_bases
ATGAATCAAAGACATTTGTGGACTATTGTTGCCCTATCTGTAACTGTTTTGGGTACGCCCGCAGTCGGTCGGACTCAAAC
TACTAAAGCTACAGCACCAGCACAGCAAATCCTAGCTAGTGATGCAGTCAAGGTAGGAGAGTTTCAATCATCAGAAGGGA
AAAGAACCTCGGATGCTGTGATTACGAGCATTCATCCTCATAACCTTGGAGGTCGTAGGGCGGCAACCCTATTTATTCGG
AAAATTCCAGTTCTTACCTTTGTGAGTTCTAACCCAGTTGCCAGCGTGGAGACAAAAGTAGGAGCAATTGGAGATAATGA
GGGCGTGCAACCGTACGCCCTTAATACTGAGAAATCAGTTCAGGTGGCAAGTCTGGGGAATTTAGCAGATGCCAGAATCC
AGAACCGTTCGCAAAACGACGATCCCGTTAAAAGAGCTAGTTTAGTAGCAGCAAAAATCAATCAGCTCATCAGGGATAAT
GTCAAGGCTGACCAGATTACTGTAAGTTGGAAGGGTGCAGACTCTTCATTAGTTGCCTCTCAATCTCAAAATAAAAGTTC
TTCCAGTCAGCAAAAGTCAGAGCGCTACACCATCAAAGTCAAGAATCAAGAATTGGTGGAAATTAATCAAAACACAAGGC
TAGCAGATTCCACCAACAACCTTGCTAACGATGCGTTGCAAGCAACTAATCGTCTCCGCAGACTTGTAGGTAATGCTTCG
CCTCTCAAAGAAATCGCTAATTTACCAGCACGCTCACCAAAGCGTTCGTCAAACCCAATAGCAAATCTGCCGCAGCGAAT
TGCTAGCAGTATTAGACTCAGTTTTCAGGGGATAGCTTCCTTTTATGGACGTGGAGATGGGTTTGCTGGCAGACCAACTG
CTACTGGTGAGAGATTTAATCCAGAAGCCATGACTGCTGCTCATCGTAGCTTACCTTTCGGCACAAGAGTTCGTGTTACC
AATACCCGCAACGGTCGTTCTGTAGTGGTGCGAATCAACGACCGGGGCCCATTTACTCGCGGCCGAGTGATTGATTTATC
CACAGGTGCAGCCAGAGTGTTAGGAATGATCGGTAGTGGTGTTGCACCAGTCAGGATTGAAGTTTTGGGAAGATAG

Upstream 100 bases:

>100_bases
CGGAACGAGTTTGCATTTTTAGGAGTTGCCACTAAAAGTGAAGCAAATTCTTATGAGTTAACAAAACTGCTGTTCTACAG
TCGCTTTAAAAATCGGACGC

Downstream 100 bases:

>100_bases
AGATTAGGGATTGGCAAGGGAAAATGAGGGGATAGGGAAAGCAGGAGACCAGTATCCCCCATGACCCAGTACCCAATTCC
TAATACCCAACCCCCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAQQILASDAVKVGEFQSSEGKRTSDAVITSIHPHNLGGRRAATLFIR
KIPVLTFVSSNPVASVETKVGAIGDNEGVQPYALNTEKSVQVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRDN
VKADQITVSWKGADSSLVASQSQNKSSSSQQKSERYTIKVKNQELVEINQNTRLADSTNNLANDALQATNRLRRLVGNAS
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGRGDGFAGRPTATGERFNPEAMTAAHRSLPFGTRVRVT
NTRNGRSVVVRINDRGPFTRGRVIDLSTGAARVLGMIGSGVAPVRIEVLGR

Sequences:

>Translated_371_residues
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAQQILASDAVKVGEFQSSEGKRTSDAVITSIHPHNLGGRRAATLFIR
KIPVLTFVSSNPVASVETKVGAIGDNEGVQPYALNTEKSVQVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRDN
VKADQITVSWKGADSSLVASQSQNKSSSSQQKSERYTIKVKNQELVEINQNTRLADSTNNLANDALQATNRLRRLVGNAS
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGRGDGFAGRPTATGERFNPEAMTAAHRSLPFGTRVRVT
NTRNGRSVVVRINDRGPFTRGRVIDLSTGAARVLGMIGSGVAPVRIEVLGR
>Mature_371_residues
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAQQILASDAVKVGEFQSSEGKRTSDAVITSIHPHNLGGRRAATLFIR
KIPVLTFVSSNPVASVETKVGAIGDNEGVQPYALNTEKSVQVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRDN
VKADQITVSWKGADSSLVASQSQNKSSSSQQKSERYTIKVKNQELVEINQNTRLADSTNNLANDALQATNRLRRLVGNAS
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGRGDGFAGRPTATGERFNPEAMTAAHRSLPFGTRVRVT
NTRNGRSVVVRINDRGPFTRGRVIDLSTGAARVLGMIGSGVAPVRIEVLGR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family

Homologues:

Organism=Escherichia coli, GI1786852, Length=83, Percent_Identity=49.3975903614458, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLPA_NOSS1 (Q8YSZ4)

Other databases:

- EMBL:   BA000019
- PIR:   AH2172
- RefSeq:   NP_486975.1
- ProteinModelPortal:   Q8YSZ4
- STRING:   Q8YSZ4
- GeneID:   1106533
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2935
- NMPDR:   fig|103690.1.peg.3242
- eggNOG:   COG0797
- HOGENOM:   HBG701137
- OMA:   NPEAMTA
- ProtClustDB:   CLSK895845
- BioCyc:   NSP103690:ALR2935-MONOMER
- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- Gene3D:   G3DSA:2.40.40.10
- TIGRFAMs:   TIGR00413

Pfam domain/function: PF03330 DPBB_1; SSF50685 Barwin_like

EC number: NA

Molecular weight: Translated: 39813; Mature: 39813

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAQQILASDAVKVGEFQSSEGKRTSDAV
CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEE
ITSIHPHNLGGRRAATLFIRKIPVLTFVSSNPVASVETKVGAIGDNEGVQPYALNTEKSV
EEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCEEHHHEECCCCCCCCCCCEEECCCCCE
QVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRDNVKADQITVSWKGADSSLVAS
EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHC
QSQNKSSSSQQKSERYTIKVKNQELVEINQNTRLADSTNNLANDALQATNRLRRLVGNAS
CCCCCCCHHHHHCCEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCC
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGRGDGFAGRPTATGERFN
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PEAMTAAHRSLPFGTRVRVTNTRNGRSVVVRINDRGPFTRGRVIDLSTGAARVLGMIGSG
CHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCC
VAPVRIEVLGR
CCCEEEEEECC
>Mature Secondary Structure
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAQQILASDAVKVGEFQSSEGKRTSDAV
CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEE
ITSIHPHNLGGRRAATLFIRKIPVLTFVSSNPVASVETKVGAIGDNEGVQPYALNTEKSV
EEEECCCCCCCCHHHHHHHHHCCEEEEECCCCCEEHHHEECCCCCCCCCCCEEECCCCCE
QVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRDNVKADQITVSWKGADSSLVAS
EEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHC
QSQNKSSSSQQKSERYTIKVKNQELVEINQNTRLADSTNNLANDALQATNRLRRLVGNAS
CCCCCCCHHHHHCCEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCC
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGRGDGFAGRPTATGERFN
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PEAMTAAHRSLPFGTRVRVTNTRNGRSVVVRINDRGPFTRGRVIDLSTGAARVLGMIGSG
CHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCC
VAPVRIEVLGR
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840