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The map label for this gene is fabG1 [H]

Identifier: 17230412

GI number: 17230412

Start: 3560914

End: 3561351

Strand: Direct

Name: fabG1 [H]

Synonym: alr2920

Alternate gene names: 17230412

Gene position: 3560914-3561351 (Clockwise)

Preceding gene: 17230395

Following gene: 17230413

Centisome position: 55.52

GC content: 40.87

Gene sequence:

>438_bases
ATGGATTCTCAAACAGGTAATAACAGCATTTTGCATACAAAAATAGAGACTTTACAACAAACAATAGATACAAATGTTTA
TGGAGTTTTGCGAGTAACTCAGGCATTAATAACCTTAATGCAGGAACAAAACTATGGTCGAATTGTCAATGTTTCTTCCG
GCGCTGGACAGTTAACTGATATGGGTTCGGGTATACCCACATATCGCATTTCCAAAACAGCCTTAAATGCACTGATGCGA
ATTTTTGCCAGTGAATTAAAAGGGACGAATATTTTAGTTAATTCTGTGTGTCCTGGTTGGGTTAAAACTGATATGGGTGG
GAAAGATGCACCACGAACCCCTGAAGAGGGAGTTGATACAATCGTCTGGCTAGCAACTCTTCCTGATGGTGGTGCTTCTG
GTGGTTTCTTCCGCGATCGCCAGCCAATAGATTGGTAA

Upstream 100 bases:

>100_bases
GATTGGTAGTCGGTCGAGTTTGATATTACTCACAATTCGATAGATCACCCAAACAATCTCGTATGGATTACTCGCTTCAC
TTAACAATGCAGCCATCTAT

Downstream 100 bases:

>100_bases
TGAAATATTAGGAATTAAATATGATTATTAAATATATTTAAGTTTTTGTAGGGTGTGCAATGTCGATAATTTTATCCATT
GTCATGATTGATTGATACCA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 1 [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDSQTGNNSILHTKIETLQQTIDTNVYGVLRVTQALITLMQEQNYGRIVNVSSGAGQLTDMGSGIPTYRISKTALNALMR
IFASELKGTNILVNSVCPGWVKTDMGGKDAPRTPEEGVDTIVWLATLPDGGASGGFFRDRQPIDW

Sequences:

>Translated_145_residues
MDSQTGNNSILHTKIETLQQTIDTNVYGVLRVTQALITLMQEQNYGRIVNVSSGAGQLTDMGSGIPTYRISKTALNALMR
IFASELKGTNILVNSVCPGWVKTDMGGKDAPRTPEEGVDTIVWLATLPDGGASGGFFRDRQPIDW
>Mature_145_residues
MDSQTGNNSILHTKIETLQQTIDTNVYGVLRVTQALITLMQEQNYGRIVNVSSGAGQLTDMGSGIPTYRISKTALNALMR
IFASELKGTNILVNSVCPGWVKTDMGGKDAPRTPEEGVDTIVWLATLPDGGASGGFFRDRQPIDW

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4502599, Length=180, Percent_Identity=30.5555555555556, Blast_Score=73, Evalue=9e-14,
Organism=Homo sapiens, GI4502601, Length=153, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193207563, Length=138, Percent_Identity=36.231884057971, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17558992, Length=104, Percent_Identity=37.5, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17558990, Length=145, Percent_Identity=33.1034482758621, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI72001658, Length=135, Percent_Identity=37.037037037037, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17558994, Length=145, Percent_Identity=30.3448275862069, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559962, Length=120, Percent_Identity=35, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17532177, Length=145, Percent_Identity=33.7931034482759, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17559964, Length=121, Percent_Identity=32.2314049586777, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 15716; Mature: 15716

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQTGNNSILHTKIETLQQTIDTNVYGVLRVTQALITLMQEQNYGRIVNVSSGAGQLTD
CCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
MGSGIPTYRISKTALNALMRIFASELKGTNILVNSVCPGWVKTDMGGKDAPRTPEEGVDT
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCE
IVWLATLPDGGASGGFFRDRQPIDW
EEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSQTGNNSILHTKIETLQQTIDTNVYGVLRVTQALITLMQEQNYGRIVNVSSGAGQLTD
CCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
MGSGIPTYRISKTALNALMRIFASELKGTNILVNSVCPGWVKTDMGGKDAPRTPEEGVDT
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCE
IVWLATLPDGGASGGFFRDRQPIDW
EEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]