Click here to switch to the map view.

The map label for this gene is 17230408

Identifier: 17230408

GI number: 17230408

Start: 3557324

End: 3558289

Strand: Reverse

Name: 17230408

Synonym: all2916

Alternate gene names: NA

Gene position: 3558289-3557324 (Counterclockwise)

Preceding gene: 17230409

Following gene: 17230407

Centisome position: 55.48

GC content: 41.1

Gene sequence:

>966_bases
GTGCAAAACCGCTATATGTCTCTGAGAATAGATCGTGGATTATTTAAATATGATTTCATAGACCATCACGCAATCTTGTG
TGTAGCTGTTGATGCAGATGCTAAAGAAATCCGCAAGCGATATCTGAAAATTGCTCGCCATTTACACCCTGATAGCAGTA
CTATCGTCACCGAGACAGAAAAAAAATTAGCTAGCGAATTATTATCAAAGTTGGTAAATCCAGCTTATGAGACACTATCA
GTAGAACGAACTCGTTCAGAGTACATTATTGTTTTATCCCAAATAGGTAAGCGTTTATTACAGGAATCAGCTTCCATTGA
ACTGACTACTGATTTAGCTAAACAGTTAGCATCTGCCCCCAATTTTGATTTACTTTATAAAAGTGCGATCGCTAAAATGG
GGGAAACTCAATATAACTCGCTCAAAGAGGCAATTCCCATCATTTCCCAAATTAGCGAGTTGAATTTAGTTTACTTGATG
CGGACTGCGGGGAAAGCTCTTGCCGCACCAGCACCAGCCGCTAAATCCACAGTTAGCTCAACCTCCACTCAGCCAACCAA
CAACTCTGCACCACCCCCACCAGAACTACCAAAAGAAGATTCGTCTGTTGACCAGTATTTGCGCCGCGCTCAAACTTTGA
TTGACAAAAACCAATTCCCCCCAGCCGAAGTAGAGTTGAAAGATGCGCTGAAGATAGCTCCTAAGAGCAGCCGTTGTCAT
AGCTTGCTGGCTTTTATATATCTGAAGCAAAATAAGCTGAAAATGGCAAAAATTCATTTCGATAATGCCCTAAAATTAGA
CCCCAATGATCAAACAGCGTTGACATGGAAACCTAAAATAGATAAGGCTCTAGGTCAACAATCTAGTAGCTCTAATGTCA
ATGCACCTTCCAGTAATGGCGATAAACAGTCAGATAAATCTGGAGGTGGTTTGTTTGGTGGCTTGTTTGGTGGGAAGAAA
AAATAG

Upstream 100 bases:

>100_bases
TAGATGAAGATTCACCAAAGAGTAGTAAATAATTTCTATAGACCACTGACGTTTACCCGATCAAGCGCAGTAAACTAGAA
AAAATCTTACGCCTTCCTTG

Downstream 100 bases:

>100_bases
TCAGCGACTCACCCTAAGCGCTATTGCATGATGGTGGAATTTTGCCCCTAACCTCCGGGATGGGACGATACAAAAGCTGA
CATTGACGCGCTACTAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain-Containing Protein; DNAJ-Like Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MQNRYMSLRIDRGLFKYDFIDHHAILCVAVDADAKEIRKRYLKIARHLHPDSSTIVTETEKKLASELLSKLVNPAYETLS
VERTRSEYIIVLSQIGKRLLQESASIELTTDLAKQLASAPNFDLLYKSAIAKMGETQYNSLKEAIPIISQISELNLVYLM
RTAGKALAAPAPAAKSTVSSTSTQPTNNSAPPPPELPKEDSSVDQYLRRAQTLIDKNQFPPAEVELKDALKIAPKSSRCH
SLLAFIYLKQNKLKMAKIHFDNALKLDPNDQTALTWKPKIDKALGQQSSSSNVNAPSSNGDKQSDKSGGGLFGGLFGGKK
K

Sequences:

>Translated_321_residues
MQNRYMSLRIDRGLFKYDFIDHHAILCVAVDADAKEIRKRYLKIARHLHPDSSTIVTETEKKLASELLSKLVNPAYETLS
VERTRSEYIIVLSQIGKRLLQESASIELTTDLAKQLASAPNFDLLYKSAIAKMGETQYNSLKEAIPIISQISELNLVYLM
RTAGKALAAPAPAAKSTVSSTSTQPTNNSAPPPPELPKEDSSVDQYLRRAQTLIDKNQFPPAEVELKDALKIAPKSSRCH
SLLAFIYLKQNKLKMAKIHFDNALKLDPNDQTALTWKPKIDKALGQQSSSSNVNAPSSNGDKQSDKSGGGLFGGLFGGKK
K
>Mature_321_residues
MQNRYMSLRIDRGLFKYDFIDHHAILCVAVDADAKEIRKRYLKIARHLHPDSSTIVTETEKKLASELLSKLVNPAYETLS
VERTRSEYIIVLSQIGKRLLQESASIELTTDLAKQLASAPNFDLLYKSAIAKMGETQYNSLKEAIPIISQISELNLVYLM
RTAGKALAAPAPAAKSTVSSTSTQPTNNSAPPPPELPKEDSSVDQYLRRAQTLIDKNQFPPAEVELKDALKIAPKSSRCH
SLLAFIYLKQNKLKMAKIHFDNALKLDPNDQTALTWKPKIDKALGQQSSSSNVNAPSSNGDKQSDKSGGGLFGGLFGGKK
K

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35397; Mature: 35397

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRYMSLRIDRGLFKYDFIDHHAILCVAVDADAKEIRKRYLKIARHLHPDSSTIVTETE
CCCCEEEEEECCCCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHH
KKLASELLSKLVNPAYETLSVERTRSEYIIVLSQIGKRLLQESASIELTTDLAKQLASAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCEEEHHHHHHHHHCCC
NFDLLYKSAIAKMGETQYNSLKEAIPIISQISELNLVYLMRTAGKALAAPAPAAKSTVSS
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCHHCCCCCHHHHHHCC
TSTQPTNNSAPPPPELPKEDSSVDQYLRRAQTLIDKNQFPPAEVELKDALKIAPKSSRCH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCHHHH
SLLAFIYLKQNKLKMAKIHFDNALKLDPNDQTALTWKPKIDKALGQQSSSSNVNAPSSNG
HHHHHHHHHCCCEEEEEEEECCEEEECCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCC
DKQSDKSGGGLFGGLFGGKKK
CCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MQNRYMSLRIDRGLFKYDFIDHHAILCVAVDADAKEIRKRYLKIARHLHPDSSTIVTETE
CCCCEEEEEECCCCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEHHH
KKLASELLSKLVNPAYETLSVERTRSEYIIVLSQIGKRLLQESASIELTTDLAKQLASAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCEEEHHHHHHHHHCCC
NFDLLYKSAIAKMGETQYNSLKEAIPIISQISELNLVYLMRTAGKALAAPAPAAKSTVSS
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCHHCCCCCHHHHHHCC
TSTQPTNNSAPPPPELPKEDSSVDQYLRRAQTLIDKNQFPPAEVELKDALKIAPKSSRCH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHCCCCCHHHH
SLLAFIYLKQNKLKMAKIHFDNALKLDPNDQTALTWKPKIDKALGQQSSSSNVNAPSSNG
HHHHHHHHHCCCEEEEEEEECCEEEECCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCC
DKQSDKSGGGLFGGLFGGKKK
CCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA