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The map label for this gene is cmpA [H]

Identifier: 17230369

GI number: 17230369

Start: 3509080

End: 3510456

Strand: Direct

Name: cmpA [H]

Synonym: alr2877

Alternate gene names: 17230369

Gene position: 3509080-3510456 (Clockwise)

Preceding gene: 17230365

Following gene: 17230370

Centisome position: 54.71

GC content: 42.99

Gene sequence:

>1377_bases
ATGACAGAGTTTTTTAATCAATTTTCTCGCCGTAAATTTATATTTACCGCAGGAGCTTCGGCAAGTGCTGTGTTCCTCAA
AGGTTGCTTGGGAAATCCACCGGAAACTACTGGAGGAACACAATCTGCACCAACGGCGCAACCTGCTGCTAATGTTAGCG
CAGAGCAAGCACCGGAAGTCACTACAGTGAAGTTAGGATACATTCCCATTGTAGAATCTGCTCCTTTAATTATTGCTAAG
GAAAAAGGTTTCTTTGCTAAGTATGGATTGACGAATGTAGAGCTTTCTAAACAAGCTTCTTGGGGTTCTGCTAGAGATAA
CGTAGAAATTGGTTCTGCTGGTGGTGGAATTGATGGTGGTCAATGGCAAATGCCTATGCCACATTTAATTACCGAAGGTT
TAATTACCAAAGGTAATCAAAAGATCCCCATGTATGTATTATGTCAATTAATTACACATGGGAATGGAATTGCGATCGCC
AACAAACATCAAGGTAGTGGTATAGGCCTAAGGTTAGCTAGTGCTAAGTCTTTATTTTCCAAACTCAAAGCCTCCCCCAC
ACCCTTCACAGCTGCTCAAACCTTCCCCGCAGTTAATCAAGATTTCTGGATTCGTTACTGGTTAGCAGCTGGTGGTATTG
ACCCTGATGCAGACGTGAAACTGCTCACAGTTCCATCAGCGCAGACTGTCGCCAACATGAAGACAGGAACAATGGATGCG
TTCAGCACTGGAGACCCCTGGCCTTTCCGCATCGTTAAAGACAAAGTCGGTTTCATGGCTGCATTAACAGCAGAAATTTG
GAAGAATCACCCCGAAGAATATCTCGCTATGAGATCTGACTGGGTTGACCAACATCCCAAAGCGACGAAAGCACTGTTAA
AAGGTCTGATGGAAGCTCAACAATGGTGTGATAACTTTGATAACCGCAAAGAACTGGCAGAAATTGTCGCAGCACGGGCT
TACTTCAACGTGCCAGTTGATGTTTTAATCGACCCATATATGGGTAAATATGACATGGGTGAAGGTCGCCAAATTGATGA
TAGATCAATGGCAGCCTTGTATTGGAAAGATGAGAAAGGCAGCGTTTCTTATCCTTATAAGAGCCATGATTTGTGGTTCA
TTACCGAAAGTGTACGTTGGGGATTCTTACCCAAGGATTACATTGATAATAATGCTGCTAAAGCGAGAGCATTAATTGAT
AAAGTTAACCGCGAAGATATTTGGAAAGAAGCAGCGAAAGAAGCCGGTATTGCGGCTGCTGACATTCCCACTAGCACATC
TCGTGGTATAGAAGAATTTTTTGATGGTGTAAAATTCGACCCCGAAAATCCTCAAGCATATCTGAAGAGTTTGCAAATTA
AGAAAGTGAGCGTTTAG

Upstream 100 bases:

>100_bases
GTATGGTGAAAAAGGTTTTCGTATATTGCACGAAACATCTATTTTGCCTGCATGAATTGTCATGTTTACAAAAATTTAAA
TTCGATTTAAGAGGCTATAT

Downstream 100 bases:

>100_bases
CAGTTAGTCATCAGTCATCAGTCAAGAAAATCGCTACACTCTTGCAACATTTTTCCACGCGTTATTCGTCATCTGAGGAA
CATTAAAGTCATGACCGTAG

Product: bicarbonate transport bicarbonate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MTEFFNQFSRRKFIFTAGASASAVFLKGCLGNPPETTGGTQSAPTAQPAANVSAEQAPEVTTVKLGYIPIVESAPLIIAK
EKGFFAKYGLTNVELSKQASWGSARDNVEIGSAGGGIDGGQWQMPMPHLITEGLITKGNQKIPMYVLCQLITHGNGIAIA
NKHQGSGIGLRLASAKSLFSKLKASPTPFTAAQTFPAVNQDFWIRYWLAAGGIDPDADVKLLTVPSAQTVANMKTGTMDA
FSTGDPWPFRIVKDKVGFMAALTAEIWKNHPEEYLAMRSDWVDQHPKATKALLKGLMEAQQWCDNFDNRKELAEIVAARA
YFNVPVDVLIDPYMGKYDMGEGRQIDDRSMAALYWKDEKGSVSYPYKSHDLWFITESVRWGFLPKDYIDNNAAKARALID
KVNREDIWKEAAKEAGIAAADIPTSTSRGIEEFFDGVKFDPENPQAYLKSLQIKKVSV

Sequences:

>Translated_458_residues
MTEFFNQFSRRKFIFTAGASASAVFLKGCLGNPPETTGGTQSAPTAQPAANVSAEQAPEVTTVKLGYIPIVESAPLIIAK
EKGFFAKYGLTNVELSKQASWGSARDNVEIGSAGGGIDGGQWQMPMPHLITEGLITKGNQKIPMYVLCQLITHGNGIAIA
NKHQGSGIGLRLASAKSLFSKLKASPTPFTAAQTFPAVNQDFWIRYWLAAGGIDPDADVKLLTVPSAQTVANMKTGTMDA
FSTGDPWPFRIVKDKVGFMAALTAEIWKNHPEEYLAMRSDWVDQHPKATKALLKGLMEAQQWCDNFDNRKELAEIVAARA
YFNVPVDVLIDPYMGKYDMGEGRQIDDRSMAALYWKDEKGSVSYPYKSHDLWFITESVRWGFLPKDYIDNNAAKARALID
KVNREDIWKEAAKEAGIAAADIPTSTSRGIEEFFDGVKFDPENPQAYLKSLQIKKVSV
>Mature_457_residues
TEFFNQFSRRKFIFTAGASASAVFLKGCLGNPPETTGGTQSAPTAQPAANVSAEQAPEVTTVKLGYIPIVESAPLIIAKE
KGFFAKYGLTNVELSKQASWGSARDNVEIGSAGGGIDGGQWQMPMPHLITEGLITKGNQKIPMYVLCQLITHGNGIAIAN
KHQGSGIGLRLASAKSLFSKLKASPTPFTAAQTFPAVNQDFWIRYWLAAGGIDPDADVKLLTVPSAQTVANMKTGTMDAF
STGDPWPFRIVKDKVGFMAALTAEIWKNHPEEYLAMRSDWVDQHPKATKALLKGLMEAQQWCDNFDNRKELAEIVAARAY
FNVPVDVLIDPYMGKYDMGEGRQIDDRSMAALYWKDEKGSVSYPYKSHDLWFITESVRWGFLPKDYIDNNAAKARALIDK
VNREDIWKEAAKEAGIAAADIPTSTSRGIEEFFDGVKFDPENPQAYLKSLQIKKVSV

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Binds bicarbonate with high affinity [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50293; Mature: 50161

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFFNQFSRRKFIFTAGASASAVFLKGCLGNPPETTGGTQSAPTAQPAANVSAEQAPEV
CCHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCE
TTVKLGYIPIVESAPLIIAKEKGFFAKYGLTNVELSKQASWGSARDNVEIGSAGGGIDGG
EEEEEEEEEEECCCCEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEECCCCCCCCCC
QWQMPMPHLITEGLITKGNQKIPMYVLCQLITHGNGIAIANKHQGSGIGLRLASAKSLFS
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHH
KLKASPTPFTAAQTFPAVNQDFWIRYWLAAGGIDPDADVKLLTVPSAQTVANMKTGTMDA
HHCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCC
FSTGDPWPFRIVKDKVGFMAALTAEIWKNHPEEYLAMRSDWVDQHPKATKALLKGLMEAQ
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QWCDNFDNRKELAEIVAARAYFNVPVDVLIDPYMGKYDMGEGRQIDDRSMAALYWKDEKG
HHHCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC
SVSYPYKSHDLWFITESVRWGFLPKDYIDNNAAKARALIDKVNREDIWKEAAKEAGIAAA
CEECCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
DIPTSTSRGIEEFFDGVKFDPENPQAYLKSLQIKKVSV
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCEEEECC
>Mature Secondary Structure 
TEFFNQFSRRKFIFTAGASASAVFLKGCLGNPPETTGGTQSAPTAQPAANVSAEQAPEV
CHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCE
TTVKLGYIPIVESAPLIIAKEKGFFAKYGLTNVELSKQASWGSARDNVEIGSAGGGIDGG
EEEEEEEEEEECCCCEEEEECCCCEEECCCCCEEECCCCCCCCCCCCEEECCCCCCCCCC
QWQMPMPHLITEGLITKGNQKIPMYVLCQLITHGNGIAIANKHQGSGIGLRLASAKSLFS
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHHHHHH
KLKASPTPFTAAQTFPAVNQDFWIRYWLAAGGIDPDADVKLLTVPSAQTVANMKTGTMDA
HHCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCC
FSTGDPWPFRIVKDKVGFMAALTAEIWKNHPEEYLAMRSDWVDQHPKATKALLKGLMEAQ
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QWCDNFDNRKELAEIVAARAYFNVPVDVLIDPYMGKYDMGEGRQIDDRSMAALYWKDEKG
HHHCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC
SVSYPYKSHDLWFITESVRWGFLPKDYIDNNAAKARALIDKVNREDIWKEAAKEAGIAAA
CEECCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
DIPTSTSRGIEEFFDGVKFDPENPQAYLKSLQIKKVSV
CCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]