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The map label for this gene is cmpB [H]

Identifier: 17230370

GI number: 17230370

Start: 3510547

End: 3511386

Strand: Direct

Name: cmpB [H]

Synonym: alr2878

Alternate gene names: 17230370

Gene position: 3510547-3511386 (Clockwise)

Preceding gene: 17230369

Following gene: 17230371

Centisome position: 54.73

GC content: 39.88

Gene sequence:

>840_bases
ATGACCGTAGCTCAAAGAAGAACCGCTAATCCTAAATTTGACCACGGCTTTTTGTCTCAACTACAAAAGCAATTTCCCAA
CATTGTACCGCCAGCGATCGCCATTGCTATCTTTCTAGCTTTGTGGCAATTATTTTCTTGGACTCCTGGGGCAACATTAC
CAGGACCAATCAAGGTTGTACAGGATACTTGGATGTTGATTTTGTATCCTTTCTATGATAGAGGCGGTATTGATAAAGGA
TTATTTTGGCAGATTTTTGCTAGTCTACAACGGGTAGCTATTGGTTACTTTTTTGCTGCCGTGGTTGGTATTGCTTTAGG
CATTGTCATTGGTGTTAATAAAACCATGTCTAAAGCTTTAGATCCTCTATTTCAGTTATTACGAACTGTACCGCCTTTAG
CTTGGGTGCCTATTTCCTTAGCAGCCCTACGTCAAAACGAACCTGCCGCCCTATTCGTAATTTTTATCACTGCAATTTGG
CCGATTCTTATCAACACTGCGGTTGGTGTCAAAGAAATTCCTCAAGACTATAATAACGTCGCCAAAGTTCTGCAACTTTC
AAAAAAAGAGTATTTCTTGAATATCCTCATTCCTGCTGCCTTACCCTACATTTTTACAGGTTTGAGAATTGCAATTGGTT
TAGCTTGGTTGGCGATTATCGCCGCAGAAATTGTGATGTCAGGTATTGTAGGTATTGGCTTTTTTATCTGGGATGCTTAC
CAAAATAACTACATCAGCGAAATTATCTTGGCACTTGTTTACATTGGTGCAGTGGGTTTGTTACTAGACAAGCTGATGGT
TTGGATTCAAAACTTGATTTTACCAACAGAACAGAAGTAG

Upstream 100 bases:

>100_bases
GAGCGTTTAGCAGTTAGTCATCAGTCATCAGTCAAGAAAATCGCTACACTCTTGCAACATTTTTCCACGCGTTATTCGTC
ATCTGAGGAACATTAAAGTC

Downstream 100 bases:

>100_bases
TCATTAGTCATTAGCCCTTAGTTTTTTACTAATGACTAATGAGCAACTAACAAAGTCATGGGGAACAAAGGAAATGAGCG
TATTTGTTGCAGTTGACCAA

Product: bicarbonate transport permease protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTVAQRRTANPKFDHGFLSQLQKQFPNIVPPAIAIAIFLALWQLFSWTPGATLPGPIKVVQDTWMLILYPFYDRGGIDKG
LFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEPAALFVIFITAIW
PILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAY
QNNYISEIILALVYIGAVGLLLDKLMVWIQNLILPTEQK

Sequences:

>Translated_279_residues
MTVAQRRTANPKFDHGFLSQLQKQFPNIVPPAIAIAIFLALWQLFSWTPGATLPGPIKVVQDTWMLILYPFYDRGGIDKG
LFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEPAALFVIFITAIW
PILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAY
QNNYISEIILALVYIGAVGLLLDKLMVWIQNLILPTEQK
>Mature_278_residues
TVAQRRTANPKFDHGFLSQLQKQFPNIVPPAIAIAIFLALWQLFSWTPGATLPGPIKVVQDTWMLILYPFYDRGGIDKGL
FWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKALDPLFQLLRTVPPLAWVPISLAALRQNEPAALFVIFITAIWP
ILINTAVGVKEIPQDYNNVAKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAYQ
NNYISEIILALVYIGAVGLLLDKLMVWIQNLILPTEQK

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=189, Percent_Identity=31.7460317460317, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI87081802, Length=229, Percent_Identity=31.8777292576419, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30978; Mature: 30847

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAQRRTANPKFDHGFLSQLQKQFPNIVPPAIAIAIFLALWQLFSWTPGATLPGPIKVV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QDTWMLILYPFYDRGGIDKGLFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKAL
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DPLFQLLRTVPPLAWVPISLAALRQNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNV
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNNYISEIILALVYIGAVGLLLDKLMVWIQNLILPTEQK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVAQRRTANPKFDHGFLSQLQKQFPNIVPPAIAIAIFLALWQLFSWTPGATLPGPIKVV
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QDTWMLILYPFYDRGGIDKGLFWQIFASLQRVAIGYFFAAVVGIALGIVIGVNKTMSKAL
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DPLFQLLRTVPPLAWVPISLAALRQNEPAALFVIFITAIWPILINTAVGVKEIPQDYNNV
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AKVLQLSKKEYFLNILIPAALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNNYISEIILALVYIGAVGLLLDKLMVWIQNLILPTEQK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA